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Protein Alignment CG12895 and sdhaf2
DIOPT Version :9
Sequence 1: | NP_001260868.1 |
Gene: | CG12895 / 36103 |
FlyBaseID: | FBgn0033523 |
Length: | 156 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017948808.1 |
Gene: | sdhaf2 / 100497541 |
XenbaseID: | XB-GENE-990420 |
Length: | 153 |
Species: | Xenopus tropicalis |
Alignment Length: | 124 |
Identity: | 58/124 - (46%) |
Similarity: | 82/124 - (66%) |
Gaps: | 6/124 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 GEIVD----YDDPPHLPVPEYPVRPDEPLETRKQRLLYQSRKRGMLENDLLLSTFVAKHLKDFNA 97
|::.| |:. .:.:|.:..|.:|..|.::.||:|:|||||||||.:|||.|..|:|.....
Frog 24 GQVSDATGTYES--EIQLPPWKERLNETPEIKRARLVYESRKRGMLENCILLSLFAKKYLSSMTD 86
Fly 98 EQTAEYDQLINGVSNDWDIFYWATDTKPTPPQFDTEIMRLLKEHVKNHEKVQRIRQPDL 156
.|.::||:|||..|||||::||||..:.||.:|:.|:|.||||..||.:..||:|||||
Frog 87 TQLSQYDRLINMPSNDWDLYYWATGAQETPKEFNNEVMDLLKEFAKNKDMEQRLRQPDL 145
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG12895 | NP_001260868.1 |
Sdh5 |
65..138 |
CDD:281870 |
38/72 (53%) |
sdhaf2 | XP_017948808.1 |
Sdh5 |
54..127 |
CDD:377166 |
38/72 (53%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
94 |
1.000 |
Domainoid score |
I7345 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H32370 |
Inparanoid |
1 |
1.050 |
127 |
1.000 |
Inparanoid score |
I4535 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1492851at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003243 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48024 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR12469 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X3172 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 8.160 |
|
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