DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBPM and AT4G09200

DIOPT Version :10

Sequence 1:NP_001303342.1 Gene:RanBPM / 36102 FlyBaseID:FBgn0262114 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_192659.2 Gene:AT4G09200 / 826501 AraportID:AT4G09200 Length:397 Species:Arabidopsis thaliana


Alignment Length:300 Identity:86/300 - (28%)
Similarity:148/300 - (49%) Gaps:28/300 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 SIGLSQNNLRVTYKGVGKQHS----DAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQ 490
            ::|.|.....|:..|:..|::    |...::|..|.|::|..|||||.|::.|..|.:.||.:.:
plant    17 TVGGSDEFTFVSPDGLSGQYTGPDHDGVVLQTENPAPTNCLAYYFEVHIMNAGEKGEIAIGFSKE 81

  Fly   491 QFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQ----TYGPTFTTGDVIGCCVNFVNNTCFYTKNG 551
            .....   |:..:|..|.|:.|...|.:|:|.    ....|:||||::||.::.|:...|:||||
plant    82 HIYSE---GYTVRSCAYIGNSGLICSQNGDGDRTVAKASDTYTTGDLVGCGIDSVSQEFFFTKNG 143

  Fly   552 VDLGIAFRDLPTKLYPTVGLQTPGEEVDANF-GQEPFKFDKIVDMMKEMRSNVLRKIDRYPHLLE 615
            ..:|...|.....:|||:.|.:..|.|..|| ||..|.|| .....:.:|....|:|::    :.
plant   144 TIVGTIPRQFRRPVYPTIVLHSQNEAVTVNFGGQIAFSFD-FEHFEESLRVKKEREIEK----IS 203

  Fly   616 TPENLMNRLVSTYLVHNAFSKTAEAFNGYTNQ--------TFNEDLASIKTRQKIIKLILTGKMS 672
            ...::.:.||.|||:...:..:..|||...::        :|:|  ..:..|:|:.:||:|.::.
plant   204 MSRSISHGLVKTYLLRYGYEDSFRAFNLAASRHTVIAQENSFDE--YELHQRKKLRELIMTAEID 266

  Fly   673 QAIEHTLRSFPGLLENNKNLWFALKCRQFIEMI-NGADIE 711
            .||......:|.|:|.....:|.|.|::.:|:: .||..|
plant   267 DAIAALKDRYPQLIEGGSEAYFLLICQKIVELVRKGAIAE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBPMNP_001303342.1 Extensin_2 55..103 CDD:252669
SPRY_RanBP9_10 442..584 CDD:293966 48/150 (32%)
LisH 620..641 CDD:474848 5/20 (25%)
CTLH 655..711 CDD:128914 16/56 (29%)
CRA 846..944 CDD:214806
AT4G09200NP_192659.2 SPRY_RanBP_like 44..175 CDD:293943 44/133 (33%)
CTLH 251..367 CDD:402305 16/55 (29%)
CTLH 252..306 CDD:128914 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.

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