DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBPM and AT4G06534

DIOPT Version :10

Sequence 1:NP_001303342.1 Gene:RanBPM / 36102 FlyBaseID:FBgn0262114 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_849311.1 Gene:AT4G06534 / 826005 AraportID:AT4G06534 Length:405 Species:Arabidopsis thaliana


Alignment Length:134 Identity:35/134 - (26%)
Similarity:42/134 - (31%) Gaps:45/134 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   471 EVRIISKG--RNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGD-----DG--------NSFSSSGN 520
            |..::|.|  ..|..|.|.|       ||||....|.|:..|     ||        :..|.|.|
plant   259 EEAVLSLGLATGGSFGAGET-------RLPGKFPASIGFQSDGAIYLDGTYLFVYLHHLVSLSNN 316

  Fly   521 GQT-----------YGPTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAF----RDLPTKLYPTVG 570
            |.:           .|.:|        |.....|...|.|.|..|.|..    :..|||.|...|
plant   317 GSSNFLLLRKSKKFCGESF--------CKKVNGNIVKYMKIGCPLRIYIFGNEKWRPTKEYKRRG 373

  Fly   571 LQTP 574
            ...|
plant   374 TNQP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBPMNP_001303342.1 Extensin_2 55..103 CDD:252669
SPRY_RanBP9_10 442..584 CDD:293966 35/134 (26%)
LisH 620..641 CDD:474848
CTLH 655..711 CDD:128914
CRA 846..944 CDD:214806
AT4G06534NP_849311.1 None
Blue background indicates that the domain is not in the aligned region.

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