DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBPM and Ranbp10

DIOPT Version :9

Sequence 1:NP_001303342.1 Gene:RanBPM / 36102 FlyBaseID:FBgn0262114 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_665823.3 Gene:Ranbp10 / 74334 MGIID:1921584 Length:620 Species:Mus musculus


Alignment Length:626 Identity:295/626 - (47%)
Similarity:372/626 - (59%) Gaps:58/626 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 TSSPRVGGRRHHSTPAASSN----SPQHQGVD-PLRLLYPNVNESETPLPRCWSPHDKCLSIGLS 434
            |:.|..|..:...:....|.    ||..|.:. .|:.|||.||:.||||||.|||.||...||||
Mouse     5 TADPGAGNPQAGDSSGGDSGGGLPSPGEQELSRRLQRLYPAVNQHETPLPRSWSPKDKYNYIGLS 69

  Fly   435 QNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQQFRMNRLPG 499
            |.||||.|||.||.|.||||||..:|||::||:|||||:|:||||:|||||||:||...||||||
Mouse    70 QGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

  Fly   500 WDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAFRDLPTK 564
            |||.|||||||||:||.|||.||.||||||||||||||||.:|.||||||||..|||||.|||..
Mouse   135 WDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPAN 199

  Fly   565 LYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRYP---HLLETPENLMNRLVS 626
            ||||||||||||.|||||||:||.|| |.|.|:|.|:.|...:..:|   .|.|....|.| :||
Mouse   200 LYPTVGLQTPGEIVDANFGQQPFLFD-IEDYMREWRAKVQGTVHGFPISARLGEWQAVLQN-MVS 262

  Fly   627 TYLVHNAFSKTAEAFNGYTNQTFNEDLASIKTRQKIIKLILTGKMSQAIEHTLRSFPGLLENNKN 691
            :||||:.:..||.||...|.....|:.||||.||||.||:|.|::.:|||.|.|.:|||||:|.|
Mouse   263 SYLVHHGYCSTATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPN 327

  Fly   692 LWFALKCRQFIEMINGADIENVNNKVTATTQTMPTNQTSVIQS-TKTFKHSKSGSGNGNVNINQ- 754
            |.|.||||||:||:||.|.|     |.:.:...|.:|.|...| :.:.:|..|.|...|...:. 
Mouse   328 LLFMLKCRQFVEMVNGTDSE-----VRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHIHNTGADSP 387

  Fly   755 ---------TQQQNNTAIPAVIKPQGGDRPDIKNMLVDDNSNKCVEH-DSNSMD-VEMEPCQSHS 808
                     ..:||::..||   |.........:   ..:|...|.: :|||.| .:.:|..|.|
Mouse   388 SCSNGVASTKNKQNHSKYPA---PSSSSSSSSSS---SSSSPSSVNYSESNSTDSTKSQPHSSTS 446

  Fly   809 NGGDSSS----------NG----------NASAVRNSLDAIDEEMDVS-PSSRNCG---RVIEKI 849
            |...|.|          ||          |.:...:.|...:..||.. |..:.||   ...|:|
Mouse   447 NQETSDSEMEMEAEHYPNGVLESVSTRIVNGAYKHDDLQTDESSMDDGHPRRQLCGGNQAATERI 511

  Fly   850 LEFGKELSSMGQQLEKENLMTEEERQMLEDAFSLIAYSNPWSSPLGWLLCPSRRESVSTTLNSAI 914
            :.||:||.::.:||.:|........:||:|||||:|||:|||.|:|..|.|.:||.|...|||||
Mouse   512 ILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGHQLDPIQREPVCAALNSAI 576

  Fly   915 LESLNFERRPPLEYLVAHASELIKVIGQHSLGEDAFITIDD 955
            |||.|..::|||...:..|||.::::.:..||..:|..:||
Mouse   577 LESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDD 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBPMNP_001303342.1 Extensin_2 55..103 CDD:252669
Involucrin2 137..188 CDD:284425
SPRY_RanBP9_10 442..584 CDD:293966 111/141 (79%)
CLTH 655..938 CDD:287564 116/319 (36%)
CTLH 655..711 CDD:128914 36/55 (65%)
CRA 846..944 CDD:214806 44/97 (45%)
Ranbp10NP_665823.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 7/32 (22%)
SPRY_RanBP9_10 77..219 CDD:293966 111/141 (79%)
LisH 257..284 CDD:128913 13/27 (48%)
CTLH 291..347 CDD:128914 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..460 27/123 (22%)
CRA 507..604 CDD:214806 44/96 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847240
Domainoid 1 1.000 214 1.000 Domainoid score I2724
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 514 1.000 Inparanoid score I1289
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001704
OrthoInspector 1 1.000 - - otm42414
orthoMCL 1 0.900 - - OOG6_102407
Panther 1 1.100 - - O PTHR12864
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4441
SonicParanoid 1 1.000 - - X1611
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.920

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