DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBPM and RANBP10

DIOPT Version :9

Sequence 1:NP_001303342.1 Gene:RanBPM / 36102 FlyBaseID:FBgn0262114 Length:1127 Species:Drosophila melanogaster
Sequence 2:XP_005256127.1 Gene:RANBP10 / 57610 HGNCID:29285 Length:650 Species:Homo sapiens


Alignment Length:668 Identity:295/668 - (44%)
Similarity:370/668 - (55%) Gaps:112/668 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 TSSPRVGGRRHHSTPAASSN--------SPQHQGVD-PLRLLYPNVNESETPLPRCWSPHDKCLS 430
            |:.|..|    :..|..||.        ||..|.:. .|:.|||.||:.||||||.|||.||...
Human     5 TADPGAG----NPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNY 65

  Fly   431 IGLSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQQFRMN 495
            |||||.||||.|||.||.|.||||||..:|||::||:|||||:|:||||:|||||||:||...||
Human    66 IGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMN 130

  Fly   496 RLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAFRD 560
            |||||||.|||||||||:||.|||.||.||||||||||||||||.:|.||||||||..|||||.|
Human   131 RLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTD 195

  Fly   561 LPTKLYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRYP---HLLETPENLMN 622
            ||..||||||||||||.|||||||:||.|| |.|.|:|.|:.|...:..:|   .|.|....|.|
Human   196 LPANLYPTVGLQTPGEIVDANFGQQPFLFD-IEDYMREWRAKVQGTVHCFPISARLGEWQAVLQN 259

  Fly   623 RLVSTYLVHNAFSKTAEAFNGYTNQTFNEDLASIKTRQKIIKLILTGKMSQAIEHTLRSFPGLLE 687
             :||:||||:.:..||.||...|.....|:.||||.||||.||:|.|::.:|||.|.|.:|||||
Human   260 -MVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLE 323

  Fly   688 NNKNLWFALKCRQFIEMINGADIENVNNKVTATTQTMPTNQTSV--------------------- 731
            :|.||.|.||||||:||:||.|.|     |.:.:...|.:|.|.                     
Human   324 HNPNLLFMLKCRQFVEMVNGTDSE-----VRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTG 383

  Fly   732 ---------IQSTKTFK-HSK--------------SGSGNGNVNIN------------------- 753
                     :.|||:.: |||              |.|...:||.:                   
Human   384 ADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQ 448

  Fly   754 -------QTQQQNNTAIPAVIKPQGGDRPDIKNMLVDDNSNKCVEHDSNSMDVEMEPCQSHSNGG 811
                   |.:::.|.|.|..  |.|            ........|..:.|::|.|...:...|.
Human   449 ETSNPWLQLERRPNQAAPTT--PPG------------PTPTSTPPHSDSEMEMEAEHYPNGVLGS 499

  Fly   812 DSSSNGNASAVRNSLDAIDEEM-DVSPSSRNCG---RVIEKILEFGKELSSMGQQLEKENLMTEE 872
            .|:...|.:.....|...:..| |..|..:.||   ...|:|:.||:||.::.:||.:|......
Human   500 MSTRIVNGAYKHEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLA 564

  Fly   873 ERQMLEDAFSLIAYSNPWSSPLGWLLCPSRRESVSTTLNSAILESLNFERRPPLEYLVAHASELI 937
            ..:||:|||||:|||:|||.|:|..|.|.:||.|...||||||||.|..::|||...:..|||.:
Human   565 HTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECL 629

  Fly   938 KVIGQHSLGEDAFITIDD 955
            :::.:..||..:|..:||
Human   630 RLMARAGLGSCSFARVDD 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBPMNP_001303342.1 Extensin_2 55..103 CDD:252669
Involucrin2 137..188 CDD:284425
SPRY_RanBP9_10 442..584 CDD:293966 111/141 (79%)
CLTH 655..938 CDD:287564 114/357 (32%)
CTLH 655..711 CDD:128914 36/55 (65%)
CRA 846..944 CDD:214806 44/97 (45%)
RANBP10XP_005256127.1 SPRY_RanBP9_10 77..219 CDD:293966 111/141 (79%)
LisH 257..284 CDD:128913 13/27 (48%)
CTLH 291..347 CDD:128914 36/55 (65%)
CLTH 291..>345 CDD:287564 35/53 (66%)
CRA 537..634 CDD:214806 44/96 (46%)
CLTH <564..629 CDD:287564 35/64 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156828
Domainoid 1 1.000 214 1.000 Domainoid score I2731
eggNOG 1 0.900 - - E1_KOG1477
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 514 1.000 Inparanoid score I1311
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106989at2759
OrthoFinder 1 1.000 - - FOG0001704
OrthoInspector 1 1.000 - - otm40348
orthoMCL 1 0.900 - - OOG6_102407
Panther 1 1.100 - - O PTHR12864
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4441
SonicParanoid 1 1.000 - - X1611
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.790

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