DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBPM and Ranbp9

DIOPT Version :9

Sequence 1:NP_001303342.1 Gene:RanBPM / 36102 FlyBaseID:FBgn0262114 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_064314.2 Gene:Ranbp9 / 56705 MGIID:1928741 Length:710 Species:Mus musculus


Alignment Length:596 Identity:291/596 - (48%)
Similarity:376/596 - (63%) Gaps:65/596 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 LRLLYPNVNESETPLPRCWSPHDKCLSIGLSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLY 468
            |:.|||.|:|.||||||.|||.||...||||||||||.|||.||...||||||..:|||::||:|
Mouse   133 LKRLYPAVDEQETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIY 197

  Fly   469 YFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDV 533
            ||||:|:||||:|||||||:||...|||||||||.|||||||||:||.|||.||.||||||||||
Mouse   198 YFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDV 262

  Fly   534 IGCCVNFVNNTCFYTKNGVDLGIAFRDLPTKLYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKE 598
            ||||||.:||||||||||..|||||.|||..||||||||||||.|||||||.||.|| |.|.|:|
Mouse   263 IGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFD-IEDYMRE 326

  Fly   599 MRSNVLRKIDRYPHLLETPE--NLMNRLVSTYLVHNAFSKTAEAFNGYTNQTFNEDLASIKTRQK 661
            .|:.:..:|||:|......|  .::.::||:||||:.:..|||||...|:||..|:|||||.||:
Mouse   327 WRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHGYCATAEAFARSTDQTVLEELASIKNRQR 391

  Fly   662 IIKLILTGKMSQAIEHTLRSFPGLLENNKNLWFALKCRQFIEMINGADIENVNNKVTATTQTMPT 726
            |.||:|.|:|.:|||.|.:.:|.|||.|.||.|.||.||||||:||.|.|     |.......|.
Mouse   392 IQKLVLAGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMVNGTDSE-----VRCLGGRSPK 451

  Fly   727 NQTSVIQSTKTFK------------HS----KSGS---------GNGNVN-------INQTQQQN 759
            :|.|...|.:.|.            ||    ||.:         .||.::       .:...|.:
Mouse   452 SQDSYPVSPRPFSSPSMSPSHGMSIHSLAPGKSSTAHFSGFESCSNGVISNKAHQSYCHSKHQLS 516

  Fly   760 NTAIPAVIKPQGGDRPDIKNMLVDDNSNKCVEHDSNSMDVEMEPCQSHSNG-GDSSSNG--NASA 821
            :..:|.:            |.|....|.:.....||.:|:|.:   .:||| |::||||  |.|:
Mouse   517 SLTVPEL------------NSLNVSRSQQVNNFTSNDVDMETD---HYSNGVGETSSNGFLNGSS 566

  Fly   822 VR-NSLDAIDEEMDVSPSS---RNCG---RVIEKILEFGKELSSMGQQLEKENLMTEEERQMLED 879
            .. :.::..|.||:|..|.   :.||   ..||:::.||:||.:|.:||.:|.......::||:|
Mouse   567 KHDHEMEDCDTEMEVDCSQLRRQLCGGSQAAIERMIHFGRELQAMSEQLRRECGKNTANKKMLKD 631

  Fly   880 AFSLIAYSNPWSSPLGWLLCPSRRESVSTTLNSAILESLNFERRPPLEYLVAHASELIKVIGQHS 944
            ||||:|||:||:||:|..|.|.:||.|.:.|||||||:.|..::|||...:..|::.:.::.:..
Mouse   632 AFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLALAMGQATQCLGLMARSG 696

  Fly   945 LGEDAFITIDD 955
            :|..||.|::|
Mouse   697 VGSCAFATVED 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBPMNP_001303342.1 Extensin_2 55..103 CDD:252669
Involucrin2 137..188 CDD:284425
SPRY_RanBP9_10 442..584 CDD:293966 111/141 (79%)
CLTH 655..938 CDD:287564 115/324 (35%)
CTLH 655..711 CDD:128914 34/55 (62%)
CRA 846..944 CDD:214806 42/97 (43%)
Ranbp9NP_064314.2 SPRY_RanBP9_10 171..313 CDD:293966 111/141 (79%)
LisH 346..379 CDD:128913 14/32 (44%)
CTLH 385..441 CDD:128914 34/55 (62%)
CLTH 385..>439 CDD:287564 33/53 (62%)
CRA 597..698 CDD:214806 42/100 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847241
Domainoid 1 1.000 214 1.000 Domainoid score I2724
eggNOG 1 0.900 - - E1_KOG1477
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38057
Inparanoid 1 1.050 514 1.000 Inparanoid score I1289
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106989at2759
OrthoFinder 1 1.000 - - FOG0001704
OrthoInspector 1 1.000 - - otm42414
orthoMCL 1 0.900 - - OOG6_102407
Panther 1 1.100 - - LDO PTHR12864
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4441
SonicParanoid 1 1.000 - - X1611
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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