DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBPM and ranbp9

DIOPT Version :10

Sequence 1:NP_001303342.1 Gene:RanBPM / 36102 FlyBaseID:FBgn0262114 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_001074040.1 Gene:ranbp9 / 558976 ZFINID:ZDB-GENE-021030-5 Length:597 Species:Danio rerio


Alignment Length:582 Identity:292/582 - (50%)
Similarity:375/582 - (64%) Gaps:50/582 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 LRLLYPNVNESETPLPRCWSPHDKCLSIGLSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLY 468
            ||.|||.|||.||||||.|||.||...||||||||||.|||.||...||||||..:|||::||:|
Zfish    33 LRRLYPAVNEQETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVY 97

  Fly   469 YFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDV 533
            ||||:||||||:|||||||:||...|||||||||.|||||||||:||.|||.||.||||||||||
Zfish    98 YFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDV 162

  Fly   534 IGCCVNFVNNTCFYTKNGVDLGIAFRDLPTKLYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKE 598
            ||||||.:||||||||||..|||||.|||..||||||||||||.|||||||.||.|| |.|.|:|
Zfish   163 IGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFD-IEDYMRE 226

  Fly   599 MRSNVLRKIDRYPHLLETP---ENLMNRLVSTYLVHNAFSKTAEAFNGYTNQTFNEDLASIKTRQ 660
            .|:.:..:|||:| :.|..   :.::.::|::||||:::..|||||...|:|..:|:|||||.||
Zfish   227 WRTKIQSQIDRFP-IGEREGEWQAMIQKMVASYLVHHSYCATAEAFAKSTDQAVHEELASIKNRQ 290

  Fly   661 KIIKLILTGKMSQAIEHTLRSFPGLLENNKNLWFALKCRQFIEMINGADIENVNNKVTATTQTMP 725
            ||.||:|:|:|.:|||.|.:.:|.|||.|.:|.|.||.||||||:||.|.|     |.......|
Zfish   291 KIQKLVLSGRMGEAIETTQQLYPSLLERNPDLLFMLKVRQFIEMVNGTDSE-----VRCLGGRSP 350

  Fly   726 TNQTSVIQSTKTFK---HSKSGS-------------GNGNVNINQTQQQNNTAIPAVIKPQGGDR 774
            .:|.|...|.:.|.   |..|.|             |..:...:.:...:.:..|.:..|:.|  
Zfish   351 KSQDSYPGSPRLFNSPVHKPSSSQAYQTGFDSNYCNGVSSSKGHTSAHSHKSCPPTLSSPELG-- 413

  Fly   775 PDIKNMLVDDNSNKCVEHDSNSMDVEMEPCQSHSNG-GDSSSNG--NASAV----RNSLDAIDEE 832
                 :|......:.:.    |.:|||| ....||| .:|||||  |.|:.    :...|| |.|
Zfish   414 -----VLNGSRGQQTIV----SSEVEME-VDHFSNGVSESSSNGFLNGSSTHGTEQEDCDA-DME 467

  Fly   833 MDVSPSSRN-CG---RVIEKILEFGKELSSMGQQLEKENLMTEEERQMLEDAFSLIAYSNPWSSP 893
            :|.:.|.|. ||   ..||::::||:||.||.:.|.:|.......::||:|||||:|||:||:||
Zfish   468 VDSTQSKRQLCGGSQAAIERMIQFGRELQSMSEHLRRERGKNSANKKMLKDAFSLLAYSDPWNSP 532

  Fly   894 LGWLLCPSRRESVSTTLNSAILESLNFERRPPLEYLVAHASELIKVIGQHSLGEDAFITIDD 955
            :|:.|...:||.|.:||||||||:.|..::|||...:..|::.:.::.:...|..||.::||
Zfish   533 VGYQLDSIQREPVCSTLNSAILETHNLPKQPPLALAMGQAAQCLSLMARTGSGSCAFASVDD 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBPMNP_001303342.1 Extensin_2 55..103 CDD:252669
SPRY_RanBP9_10 442..584 CDD:293966 112/141 (79%)
LisH 620..641 CDD:474848 8/20 (40%)
CTLH 655..711 CDD:128914 34/55 (62%)
CRA 846..944 CDD:214806 42/97 (43%)
ranbp9NP_001074040.1 SPRY_RanBP9_10 71..213 CDD:293966 112/141 (79%)
LisH 246..277 CDD:128913 11/30 (37%)
CTLH 285..341 CDD:128914 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..375 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..417 4/34 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..475 16/38 (42%)
CRA 484..581 CDD:214806 42/96 (44%)
Blue background indicates that the domain is not in the aligned region.

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