DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBPM and Ranbp9

DIOPT Version :10

Sequence 1:NP_001303342.1 Gene:RanBPM / 36102 FlyBaseID:FBgn0262114 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_001414343.1 Gene:Ranbp9 / 364686 RGDID:1561940 Length:709 Species:Rattus norvegicus


Alignment Length:610 Identity:289/610 - (47%)
Similarity:378/610 - (61%) Gaps:93/610 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 LRLLYPNVNESETPLPRCWSPHDKCLSIGLSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLY 468
            |:.|||.|:|.||||||.|||.||...||||||||||.|||.||...||||||..:|||::||:|
  Rat   132 LKRLYPAVDEQETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIY 196

  Fly   469 YFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDV 533
            ||||:|:||||:|||||||:||...|||||||||.|||||||||:||.|||.||.||||||||||
  Rat   197 YFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDV 261

  Fly   534 IGCCVNFVNNTCFYTKNGVDLGIAFRDLPTKLYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKE 598
            ||||||.:||||||||||..|||||.|||..||||||||||||.|||||||.||.|| |.|.|:|
  Rat   262 IGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFD-IEDYMRE 325

  Fly   599 MRSNVLRKIDRYPHLLETPE--NLMNRLVSTYLVHNAFSKTAEAFNGYTNQTFNEDLASIKTRQK 661
            .|:.:..:|||:|......|  .::.::||:||||:.:..|||||...|:||..|:|||||.||:
  Rat   326 WRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHGYCATAEAFARSTDQTVLEELASIKNRQR 390

  Fly   662 IIKLILTGKMSQAIEHTLRSFPGLLENNKNLWFALKCRQFIEMINGADIE--------------- 711
            |.||:|.|:|.:|||.|.:.:|.|||.|.||.|.||.||||||:||.|.|               
  Rat   391 IQKLVLAGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMVNGTDSEVRCLGGRSPKSQDSY 455

  Fly   712 NVNNKVTATTQTMPTNQTSV----------------------IQSTK---TFKHSKSGSGNGNV- 750
            .|:.:..::....|::..|:                      :.|.|   ::.|||....:.|| 
  Rat   456 PVSPRPFSSPSMSPSHGMSIHSLAPGKGSTAHFPGFESCSNGVISNKAHQSYCHSKHQLSSLNVP 520

  Fly   751 -----NINQTQQQNNTAIPAVIKPQGGDRPDIKNMLVDDNSNKCVEHDSNSMDVEMEPCQSHSNG 810
                 |::::||.||                               ..||.:|:|.:   .:|||
  Rat   521 ELNSINVSRSQQVNN-------------------------------FTSNDVDMETD---HYSNG 551

  Fly   811 -GDSSSNG--NASAVR-NSLDAIDEEMDVSPSS---RNCG---RVIEKILEFGKELSSMGQQLEK 865
             |::||||  |.|:.. :.::..|.||:|..|.   :.||   ..||:::.||:||.:|.:||.:
  Rat   552 VGETSSNGFLNGSSKHDHEMEDCDTEMEVDCSQLRRQLCGGSQAAIERMIHFGRELQAMSEQLRR 616

  Fly   866 ENLMTEEERQMLEDAFSLIAYSNPWSSPLGWLLCPSRRESVSTTLNSAILESLNFERRPPLEYLV 930
            |.......::||:|||||:|||:||:||:|..|.|.:||.|.:.|||||||:.|..::|||...:
  Rat   617 ECGKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLALAM 681

  Fly   931 AHASELIKVIGQHSLGEDAFITIDD 955
            ..|::.:.::.:..:|..||.|::|
  Rat   682 GQATQCLGLMARAGVGSCAFATVED 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBPMNP_001303342.1 Extensin_2 55..103 CDD:252669
SPRY_RanBP9_10 442..584 CDD:293966 111/141 (79%)
LisH 620..641 CDD:474848 9/20 (45%)
CTLH 655..711 CDD:128914 34/55 (62%)
CRA 846..944 CDD:214806 42/97 (43%)
Ranbp9NP_001414343.1 None
Blue background indicates that the domain is not in the aligned region.

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