DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12896 and Prdx4

DIOPT Version :10

Sequence 1:NP_610584.2 Gene:CG12896 / 36101 FlyBaseID:FBgn0033521 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_017457660.1 Gene:Prdx4 / 85274 RGDID:620043 Length:282 Species:Rattus norvegicus


Alignment Length:186 Identity:54/186 - (29%)
Similarity:85/186 - (45%) Gaps:31/186 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRNTKCLAHSVDALNSHVDWVNDIK 83
            :|..:::| .::|.|.:|.|||.||.||:........||...||:.:|.|||:..:|:.|:|   
  Rat   111 LKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWIN--- 171

  Fly    84 SYCLDIP------GDFPYPIIADPTRDLAVTLGMLDEEQKKDPEVGKTIRALFIISPDHKVRLSM 142
                 .|      |....|:::|....::...|:..|:.      |.|:|.||||.....:|...
  Rat   172 -----TPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDS------GHTLRGLFIIDDKGVLRQIT 225

  Fly   143 FYPMSTGRNVDEILRTIDSLQLTDRLKVVATPANW---------TPGTKVMIL-PS 188
            ...:..||:|||.||.:.:.|.||:.......::|         ...|.||:| ||
  Rat   226 LNDLPVGRSVDETLRLVQAFQYTDKHGEDNPRSSWKTEVFRQAKLKSTSVMMLRPS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12896NP_610584.2 PRX_1cys 3..218 CDD:239314 54/186 (29%)
Prdx4XP_017457660.1 PRX_Typ2cys 91..261 CDD:239313 47/164 (29%)

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