DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12896 and Prdx4

DIOPT Version :9

Sequence 1:NP_610584.2 Gene:CG12896 / 36101 FlyBaseID:FBgn0033521 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001300640.1 Gene:Prdx4 / 53381 MGIID:1859815 Length:275 Species:Mus musculus


Alignment Length:155 Identity:47/155 - (30%)
Similarity:75/155 - (48%) Gaps:21/155 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRNTKCLAHSVDALNSHVDWVNDIK 83
            :|..:::| .::|.|.:|.|||.||.||:........||...||:.:|.|||:..:|:.|:|   
Mouse   104 LKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWIN--- 164

  Fly    84 SYCLDIP------GDFPYPIIADPTRDLAVTLGMLDEEQKKDPEVGKTIRALFIISPDHKVRLSM 142
                 .|      |....|:::|....::...|:..|:.      |.|:|.||||.....:|...
Mouse   165 -----TPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDS------GHTLRGLFIIDDKGVLRQIT 218

  Fly   143 FYPMSTGRNVDEILRTIDSLQLTDR 167
            ...:..||:|||.||.:.:.|.||:
Mouse   219 LNDLPVGRSVDETLRLVQAFQYTDK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12896NP_610584.2 AhpC 1..194 CDD:223527 47/155 (30%)
PRX_1cys 3..218 CDD:239314 47/155 (30%)
Prdx4NP_001300640.1 PRX_Typ2cys 84..254 CDD:239313 47/155 (30%)
AhpC-TSA 84..217 CDD:278975 37/127 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.710

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