DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12896 and Prdx1

DIOPT Version :10

Sequence 1:NP_610584.2 Gene:CG12896 / 36101 FlyBaseID:FBgn0033521 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_476455.1 Gene:Prdx1 / 117254 RGDID:620039 Length:199 Species:Rattus norvegicus


Alignment Length:204 Identity:66/204 - (32%)
Similarity:101/204 - (49%) Gaps:18/204 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RLGQTVPNFEA-----DTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRN 61
            ::|...|:|:|     |.....|...:::| .:||.|.:|.|||.||.||:...:....||.|.|
  Rat     7 KIGHPAPSFKATAVMPDGQFKDISLSDYKG-KYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN 70

  Fly    62 TKCLAHSVDALNSHVDWVNDIKSYCLDIPGDFPYPIIADPTRDLAVTLGMLDEEQKKDPEVGKTI 126
            .:.:..|||:...|:.|:|..|..  ...|....|:::||.|.:|...|:|..::      |.:.
  Rat    71 CQVIGASVDSHFCHLAWINTPKKQ--GGLGPMNIPLVSDPKRTIAQDYGVLKADE------GISF 127

  Fly   127 RALFIISPDHKVRLSMFYPMSTGRNVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMILPSVTD 191
            |.||||.....:|......:..||:||||||.:.:.|.||:...|. ||.|.||:.. |.|.|  
  Rat   128 RGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKHGEVC-PAGWKPGSDT-IKPDV-- 188

  Fly   192 DEAHKLFPK 200
            :::.:.|.|
  Rat   189 NKSKEYFSK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12896NP_610584.2 PRX_1cys 3..218 CDD:239314 66/203 (33%)
Prdx1NP_476455.1 PRX_Typ2cys 8..180 CDD:239313 59/181 (33%)

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