DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11825 and higd1c

DIOPT Version :10

Sequence 1:NP_001260865.1 Gene:CG11825 / 36099 FlyBaseID:FBgn0033519 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_001011329.1 Gene:higd1c / 496791 XenbaseID:XB-GENE-5935687 Length:93 Species:Xenopus tropicalis


Alignment Length:87 Identity:41/87 - (47%)
Similarity:59/87 - (67%) Gaps:1/87 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 MSSNSLFETDEDVAQANKLSRKVKESPFMLVGIAGFVAAGLIGAYKYRNRGSMSTSVFLMQLRVA 101
            |||:. ||.::....::||.:|.|||||:.:|:|||:|....|.|:.|:||....||.::..|||
 Frog     1 MSSDD-FEPEKGDTVSSKLLKKTKESPFVPIGMAGFLATVAYGVYRIRSRGQQKMSVHIIHTRVA 64

  Fly   102 AQGTVVGCLTAGLAYTMAKEYL 123
            |||.|||.:|.|:.|:|.|||:
 Frog    65 AQGFVVGAMTFGVIYSMYKEYI 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11825NP_001260865.1 HIG_1_N 61..113 CDD:461361 26/51 (51%)
higd1cNP_001011329.1 HIG_1_N 24..76 CDD:461361 26/51 (51%)

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