DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prx6c and TSA1

DIOPT Version :10

Sequence 1:NP_523683.1 Gene:Prx6c / 36098 FlyBaseID:FBgn0033518 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_013684.1 Gene:TSA1 / 854980 SGDID:S000004490 Length:196 Species:Saccharomyces cerevisiae


Alignment Length:198 Identity:63/198 - (31%)
Similarity:91/198 - (45%) Gaps:27/198 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PNFE----ADTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRNTKCLAHS 68
            |.|:    .|.....:...:::| .:|||...|..||.||.||:...:....:|.::..:.|..|
Yeast    10 PTFKKTAVVDGVFDEVSLDKYKG-KYVVLAFIPLAFTFVCPTEIIAFSEAAKKFEEQGAQVLFAS 73

  Fly    69 VDALNSHVDWVNDIKSYCLDIP------GDFPYPIIADPTRDLAVSLGMLDEEQKKDPEVGKTIR 127
            .|:..|.:.|.|        ||      |....|::||....|:...|:|.||:      |..:|
Yeast    74 TDSEYSLLAWTN--------IPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEE------GVALR 124

  Fly   128 ALFIISPDHKVRLSMFYPMSTGRNVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMILPTVTDE 192
            .||||.|...:|......:..||||||.||.:::.|.||:...| .|.|||||. ..|.|||.|.
Yeast   125 GLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNGTV-LPCNWTPGA-ATIKPTVEDS 187

  Fly   193 EAH 195
            :.:
Yeast   188 KEY 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx6cNP_523683.1 PRX_1cys 3..218 CDD:239314 63/198 (32%)
TSA1NP_013684.1 PRX_Typ2cys 5..176 CDD:239313 56/181 (31%)

Return to query results.
Submit another query.