DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prx6c and prdx6

DIOPT Version :10

Sequence 1:NP_523683.1 Gene:Prx6c / 36098 FlyBaseID:FBgn0033518 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_957099.1 Gene:prdx6 / 393778 ZFINID:ZDB-GENE-040426-1778 Length:222 Species:Danio rerio


Alignment Length:221 Identity:116/221 - (52%)
Similarity:150/221 - (67%) Gaps:12/221 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LGQTVPNFEADTTKGPIKFHEWQGNSWVVLFSHPADFTPVCTTELGRIAVHQPEFAKRNTKCLAH 67
            ||...||||||||.|.|||||:.||||.:|||||.||||||||||.|.|....||.||:.|.:|.
Zfish     6 LGDVFPNFEADTTIGKIKFHEFLGNSWGILFSHPRDFTPVCTTELARAAKLHEEFKKRDVKMIAL 70

  Fly    68 SVDALNSHVDWVNDI------KSYCLDIPGDFPYPIIADPTRDLAVSLGMLDEEQKKDPEVGKTI 126
            |:|::..|..|..||      |:.|     ..|:|||||..|:|:|.|||||.:::....:..|.
Zfish    71 SIDSVEDHRKWSEDILAFNQDKACC-----PMPFPIIADDKRELSVLLGMLDPDERDKDGMPLTA 130

  Fly   127 RALFIISPDHKVRLSMFYPMSTGRNVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMILPTVTD 191
            |.:|::.||.:::||:.||.:||||.|||||.:|||||| ..|.||||.:|.||.:||::|:::|
Zfish   131 RCVFVVGPDKRLKLSILYPATTGRNFDEILRVVDSLQLT-ATKKVATPVDWKPGQEVMVIPSLSD 194

  Fly   192 EEAHKLFPKGFDKVSMPSGVNYVRTT 217
            |||:||||.||....:|||..|:|.|
Zfish   195 EEANKLFPAGFTLKEVPSGKKYIRYT 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx6cNP_523683.1 PRX_1cys 3..218 CDD:239314 116/221 (52%)
prdx6NP_957099.1 PRX_1cys 6..221 CDD:239314 116/221 (52%)

Return to query results.
Submit another query.