DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndg and nell2b

DIOPT Version :10

Sequence 1:NP_610575.1 Gene:Ndg / 36089 FlyBaseID:FBgn0026403 Length:1350 Species:Drosophila melanogaster
Sequence 2:XP_002661425.1 Gene:nell2b / 336082 ZFINID:ZDB-GENE-030131-8026 Length:815 Species:Danio rerio


Alignment Length:815 Identity:182/815 - (22%)
Similarity:258/815 - (31%) Gaps:332/815 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 YQLTGGVYTHVSRLQFDSGE-NLHV--NQTFE------------GLNYWDQLSVKIEIYGEVPAV 448
            |.|..| :.|...|.|.:.: .||:  |:.:|            |.|.|  :..:.:.:|....|
Zfish   142 YSLADG-HWHKISLAFSATQVVLHIDCNRIYERIVETPSMEFPRGTNIW--VGQRNDAHGFFRGV 203

  Fly   449 AADAVLILPDYVEEYTFERPGELKSVQVLNINITEEQRVLGLQ------------VEQRILY--- 498
            ..|..|::..:  .|..:.|...::....|......|:::.||            .|:::.|   
Zfish   204 MQDVQLVVVPH--GYVVQCPDLNRTCPTCNDFHGLVQKIMELQDILAKTSNKLALAEEKMKYLDG 266

  Fly   499 ----RSC------LRDDEA---------------------------DPSATKV------LQKISK 520
                |:|      .||.:|                           .|....:      .::...
Zfish   267 CYCERTCTLNGEIFRDSDAWIDGCRNCTCSNGTVECESIFCPPPQCPPDTAPIYMPGACCKECQP 331

  Fly   521 VAL----DYVERDQ-------------ALRIGAMSKVGVT-------PES--------------- 546
            |.|    .|||.|:             ..|..:|.:|.:|       |||               
Zfish   332 VCLFRGRVYVEGDRKSIHDSEGNCLLFECRDRSMRRVEMTSCPDLNCPESEQITLTDRCCKVCRG 396

  Fly   547 -NACNDG-TADCVENSVCVPYEDTYRCDCYHGFAAQLDERGVEVCLDIDECATGSHVCDENAVCD 609
             :.|.:| :.:|||||.|:..|....|.|..|:.|..|:..  .|.||||||.|.|.|.||.||.
Zfish   397 HDFCTEGYSRNCVENSDCINLEAGACCSCKEGYHALRDDSA--YCQDIDECAEGKHYCRENTVCM 459

  Fly   610 NTEGGFNCYCTEGFEGNGYRCLSNSTADNIEYPPAVEGQAEPTSEPSPNPSPYPDQGQDQERERE 674
            ||.|.|.|.|..||                                                .|.
Zfish   460 NTPGSFMCVCHTGF------------------------------------------------VRI 476

  Fly   675 DDQYPQPNPYPYPEEQIPQHPDECYR----CSKDADCYQ----GRCTCHEGFDGDGYTCTNICGH 731
            ||       |...|.      |||.|    |.::|.|:.    ..|:|..|:.|:|..|..:| .
Zfish   477 DD-------YSCTEH------DECVRGLNTCDENALCFNTVGGHSCSCKPGYIGNGTFCRALC-E 527

  Fly   732 GEVWENGRCEPLLLERHDVDPLCDALGECRCPYGYELSEDSQRCTYVQEFDGERNADLIPCDVDE 796
            |:....|.|         |.|     ..|.|..|:    ..:||               ..|:||
Zfish   528 GQCLNGGSC---------VAP-----DTCVCQQGF----TGKRC---------------ETDIDE 559

  Fly   797 ------NCHINATC----NWYGQELRHICTCQPG------FRGDGYNCDPISDDSCAIRPDICDV 845
                  .|...|||    .||     | |.|:.|      |..:|.:|:.|  |.|.:....|..
Zfish   560 CSDGFVECDSRATCVNLPGWY-----H-CECRDGYHDNGMFSANGESCEDI--DECEMGRHSCAN 616

  Fly   846 HADCVYEEHLGKSECQCQAGYTGNGFNCQLAAECQ---SAEHCGENAFCDD---GVCRCQA---- 900
            ...|...:  |..:|:|.     :|.||  ..:|.   ..:|.|:....||   .||.||:    
Zfish   617 DTICFNVD--GGYDCRCP-----HGRNC--TGDCAHDGKVKHNGQIWVLDDDRCSVCSCQSGLVM 672

  Fly   901 ------DFERDVSD-----RCVPAGRCGSVFCGSNAICKWDS----AEGVQYCDCLDGYQGDALT 950
                  |.|....|     .|.|  |..|.....|.:..:.:    .|..|.|.|:.|.     .
Zfish   673 CRRMVCDCENPTVDVLCCPECDP--RLSSQCLHQNGLLAYSNGETWVENCQQCQCMRGE-----V 730

  Fly   951 GCTSKPLSCHVLNNCGIHATCEPTEDPANYECQCIAGFKGDGYVCIEEQNCLNNPTLCDMNAQCR 1015
            .|.  |:||..:::      ||.|..|             ||..|   ..|:.:|.|.|      
Zfish   731 DCW--PVSCAPVSD------CEFTVVP-------------DGECC---PRCVTDPCLAD------ 765

  Fly  1016 STNSGL--VCVCNQG---FFGNG--------SLCQ 1037
            :..:.:  .||...|   |.|:.        ||||
Zfish   766 TVRNDITKTCVDEYGISRFSGSAWTKHGTECSLCQ 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NdgNP_610575.1 NIDO 108..262 CDD:214712
EGF_3 285..320 CDD:463759
G2F 322..549 CDD:214774 44/262 (17%)
EGF_CA 591..622 CDD:429571 19/30 (63%)
EGF_3 797..828 CDD:463759 12/40 (30%)
EGF_3 836..873 CDD:463759 7/36 (19%)
EGF_3 963..995 CDD:463759 6/31 (19%)
EGF_3 1001..1036 CDD:463759 10/47 (21%)
NHL 1074..>1254 CDD:302697
NHL repeat 1074..1112 CDD:271320
LY 1107..1145 CDD:214531
NHL repeat 1117..1156 CDD:271320
LY 1152..1195 CDD:214531
NHL repeat 1161..1202 CDD:271320
NHL repeat 1210..1244 CDD:271320
nell2bXP_002661425.1 LamG 28..213 CDD:473984 17/73 (23%)
VWC 273..329 CDD:450195 5/55 (9%)
EGF_CA 441..469 CDD:429571 18/27 (67%)
EGF_3 487..522 CDD:463759 10/34 (29%)
EGF_CA 556..590 CDD:214542 13/39 (33%)
EGF_CA 603..634 CDD:429571 8/39 (21%)
VWC 641..693 CDD:450195 12/51 (24%)
VWC 710..757 CDD:214564 16/75 (21%)
Blue background indicates that the domain is not in the aligned region.

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