DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndg and Nid1

DIOPT Version :10

Sequence 1:NP_610575.1 Gene:Ndg / 36089 FlyBaseID:FBgn0026403 Length:1350 Species:Drosophila melanogaster
Sequence 2:NP_001385449.1 Gene:Nid1 / 25494 RGDID:3178 Length:1246 Species:Rattus norvegicus


Alignment Length:1517 Identity:383/1517 - (25%)
Similarity:565/1517 - (37%) Gaps:481/1517 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSSVILVSGQFEHYLDSLRASELYEFEDGSLGSIHLLPKGDSETIVLQLEQPIHFYG-EQYEQLY 77
            |..::|::|.    ...|...||:.|..|. |.:.|....|..:..|:|...:.||. .....:|
  Rat    16 LLQLLLLAGP----AGCLSRQELFPFGPGQ-GDLELEAGDDVVSPSLELIGELSFYDRSDITSVY 75

  Fly    78 INTNGILTFNSEFP--EYLNQPFPLEYASIAAFYSNVDTSFSDEGTSISLFESKEQSILDRASSL 140
            :.||||:.. ||.|  |:....||..:.|:|.|.:::||  :|...::...|.....|:..|:..
  Rat    76 VTTNGIIAM-SEPPATEFHPGTFPPSFGSVAPFLADLDT--TDGLGNVYYREDLSPFIIQMAAEY 137

  Fly   141 VRYAFSSQSEFEARQVIVATWRNVGYFDSKTDRL------NTFQVALIANEQSTFVQFIYPDGGL 199
            |:..|...| |:...|:|.||.::..:...:..|      ||||..|.::..|::..|:|||.||
  Rat   138 VQRGFPEVS-FQPTSVVVVTWESMAPYGGPSGSLVEEGKRNTFQAVLASSNSSSYAIFLYPDDGL 201

  Fly   200 NW--------------LQGETAGLGLPDIRAQAGFVAEDGRFYTLNGSGSENARFLSESTNLGVP 250
            .:              :.|.:.||        .||:.:....|.:..:..|:...|::|:|.|..
  Rat   202 QFFTTFSKKDENQVPAVVGFSKGL--------EGFLWKSNGAYNIFANDRESIENLAKSSNAGHQ 258

  Fly   251 GVWLFEV----------------------APIENE-------------------------QNVRS 268
            |||:||:                      |..|:|                         :....
  Rat   259 GVWVFEIGSPATAKGVVPADVNLDVDDDGADYEDEDYDLQTSHLGLEDVATQPFPSHSPRRGYPD 323

  Fly   269 PDN-------AESLTESP------------------------------------------ALALS 284
            |.|       :...||.|                                          ....:
  Rat   324 PHNVPRTLAPSYEATERPHGIPTERTKSFQLPVERFPQKHPQVIDVDEVEETGVVFSYNTGSQQT 388

  Fly   285 CQAHAHQCHEKAECHDKAEGYCCVCGSGFYGNGKSCLANDQPIRVTGTLTGEL---NKQ--PVSE 344
            |..:.|||...|||.|.|.|:||.|.:.:.|||:.|:|...|.||.|.:.|.:   |.|  .|.|
  Rat   389 CANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGSPQRVNGKVKGRIFVGNSQVPVVFE 453

  Fly   345 EAKLQSYVVTSEGRTYTTINPLTPELGAQLRLVLPLLTTVPWLFAKSVGGVANGYQLTGGVYTHV 409
            ...|.||||.:.||:||.|:.:...:|..|..:.|:...:.|:||....|..||:.:|||.:|..
  Rat   454 NTDLHSYVVMNHGRSYTAISTIPESVGYSLLPLAPIGGIIGWMFAVEQDGFKNGFSITGGEFTRQ 518

  Fly   410 SRLQF--DSGENLHVNQTFEGLNYWDQLSVKIEIYGEVPAVAADAVLILPDYVEEYTFERPGELK 472
            :.:.|  ..|: |.:.|.|.|::....|::..|:.|.||.:...|.:.:..|.|.|.:       
  Rat   519 AEVTFLGHPGK-LILKQQFSGIDEHGHLTINTELEGRVPQIPYGASVHIEPYTELYHY------- 575

  Fly   473 SVQVLNINITEEQRVLG-------------LQVEQRILYRSCLRDDE--ADPSATKVLQKISKVA 522
            |..|:..:.|.|..|..             .|..|.|.::.|..||.  |.||..::  .:..|.
  Rat   576 SSSVITSSSTREYTVTEPDQDSAVPSHTHVYQWRQTITFQECAHDDSRPALPSTQQL--SVDSVF 638

  Fly   523 LDYVERDQALRIGAMSKVGV----TPES--NACNDGTADCVENSVCVPYEDT-YRCDCYHGFAAQ 580
            :.|.:.::.||....:.:|.    :|::  |.|..||..|..|:.|.|...| :.|:|..||   
  Rat   639 VLYNKEERILRYALSNSIGPVRDGSPDALQNPCYIGTHGCDSNAACRPGPGTQFTCECSVGF--- 700

  Fly   581 LDERG-VEVCLDIDECATGSHVCDENAVCDNTEGGFNCYCTEGFEGNGYRCLSNSTADNIEYPPA 644
               || .:.|.|||||:.....|..:|:|:|..|.|.|.|.||:.                    
  Rat   701 ---RGDGKACYDIDECSEQPSRCGNHAICNNHPGTFRCECMEGYH-------------------- 742

  Fly   645 VEGQAEPTSEPSPNPSPYPDQG-----QDQEREREDDQYPQPNPYPYPEE-----QIPQHPDECY 699
                             :.|:|     .||            .|..|.|.     .|||.     
  Rat   743 -----------------FSDRGICVAAVDQ------------RPINYCETGLHNCDIPQR----- 773

  Fly   700 RCSKDADC-YQG----RCTCHEGFDGDGYTCTNICGHGEVWENGRCEPLLLERHDVDPLCDALGE 759
                 |.| |.|    .|:|..||.|||..|                      .|||       |
  Rat   774 -----AQCIYMGGSSYTCSCLPGFSGDGRAC----------------------QDVD-------E 804

  Fly   760 CRCPYGYELSEDSQRCTYVQEFDGERNADLIPCDVDENCHINATCNWYGQELRHICTCQPGFRGD 824
            |:                                 ...||.:|.|  |.......|.|:||::||
  Rat   805 CQ---------------------------------HSRCHPDAFC--YNTPGSFRCQCKPGYQGD 834

  Fly   825 GYNCDPISDDSCAIRPDICDVHADCVYEEHLGKSECQCQAGYTGNGFNCQLAAECQSAEHCGENA 889
            |:.|.|                      ..:||:.||.:                  .||.    
  Rat   835 GFRCVP----------------------GEVGKTRCQLE------------------REHI---- 855

  Fly   890 FCDDGVCRCQADFERDVSDRCVPAGRCGSVFCGSNAICKWDSAEG--VQYCDCLDGYQGDALTGC 952
                                   .|..|:      ...:..:.:|  |..||....|        
  Rat   856 -----------------------LGAAGA------TDAQRPTLQGMFVPQCDEYGHY-------- 883

  Fly   953 TSKPLSCHVLNNCGIHATCEPTEDPANYECQCIAGFKGDGYVCIEEQNCLNNPTLCDMNAQCRST 1017
              .|..||       |:|        .| |.|:   ..||      |...:..|...|...|.||
  Rat   884 --TPTQCH-------HST--------GY-CWCV---DRDG------QELEDTRTPPGMRPPCLST 921

  Fly  1018 NSGLVCVCNQGFFGNGSLCQERQHQ------------DSDFLIVSQGVMIARVPLNGRNVRPISV 1070
            .:..:                  ||            ....|:.:|...|.|:||....::....
  Rat   922 VAPPI------------------HQGPVVPTAVIPLPPGTHLLFAQTGKIERLPLERNTMKKTEA 968

  Fly  1071 -------AQMAIGLDKDCVEGRVYWGDISTKKIVSTKYDGTDLRPFITTDIESPEGIAIDVISRR 1128
                   |::.|||..|||:..|||.|||...|......|.:....|..|:.||||||:|.:.|.
  Rat   969 KAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRT 1033

  Fly  1129 LYWADSAKDTIEVASLDDPSLRAVIINKQLVNPRGIAVDPYREKLFWSDWDRESPKIEMSNLDGT 1193
            ::|.||..|.||||.:|. :.|.|:.:..|||||||..|..|..|:|:||:|::||||.|::|||
  Rat  1034 IFWTDSHLDRIEVAKMDG-TQRRVLFDTGLVNPRGIVTDSVRGNLYWTDWNRDNPKIETSHMDGT 1097

  Fly  1194 GRELLLGKDDVTLPNSLVVLENSGEVCYADAGTKKVECIEPQNRQIRTISNELSYPFGITFTHDQ 1258
            .|. :|.:|::.|||.|.....|.::|:.||||.:.||:.|.....|.:...|.|||.:|.....
  Rat  1098 NRR-ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPSRRKVLEGLQYPFAVTSYGKN 1161

  Fly  1259 FYWTDWTTKKVEIVDSLGARQTPIQPPFFGSHK---MYGMTVVEQHCPQYQSPCQISNGGCTDSR 1320
            .|:|||.|..|..:|...:::...    |..||   :||:|:....|||..:.|.::|||||  .
  Rat  1162 LYYTDWKTNSVIAMDLAVSKEMDA----FHPHKHTRLYGITIALSQCPQGHNYCSVNNGGCT--H 1220

  Fly  1321 LCLVNRQAPSGKSCKCTSASTG 1342
            |||   ..|..::|:|...:.|
  Rat  1221 LCL---PTPGSRTCRCPDNTLG 1239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NdgNP_610575.1 NIDO 108..262 CDD:214712 45/195 (23%)
EGF_3 285..320 CDD:463759 16/34 (47%)
G2F 322..549 CDD:214774 69/254 (27%)
EGF_CA 591..622 CDD:429571 13/30 (43%)
EGF_3 797..828 CDD:463759 12/30 (40%)
EGF_3 836..873 CDD:463759 4/36 (11%)
EGF_3 963..995 CDD:463759 7/31 (23%)
EGF_3 1001..1036 CDD:463759 5/34 (15%)
NHL 1074..>1254 CDD:302697 78/179 (44%)
NHL repeat 1074..1112 CDD:271320 15/37 (41%)
LY 1107..1145 CDD:214531 18/37 (49%)
NHL repeat 1117..1156 CDD:271320 18/38 (47%)
LY 1152..1195 CDD:214531 23/42 (55%)
NHL repeat 1161..1202 CDD:271320 21/40 (53%)
NHL repeat 1210..1244 CDD:271320 11/33 (33%)
Nid1NP_001385449.1 NIDO 106..269 CDD:214712 44/173 (25%)
EGF_3 389..424 CDD:463759 16/34 (47%)
nidG2 428..659 CDD:238158 66/240 (28%)
EGF_3 671..707 CDD:463759 14/41 (34%)
EGF_CA 709..750 CDD:214542 17/77 (22%)
EGF_3 761..799 CDD:463759 15/47 (32%)
EGF_3 810..838 CDD:463759 12/29 (41%)
Thyroglobulin_1 848..918 CDD:459665 24/155 (15%)
Ldl_recept_b 991..1029 CDD:459654 16/37 (43%)
LY 1013..1054 CDD:214531 19/41 (46%)
LY 1055..1099 CDD:214531 23/43 (53%)
LY 1100..1136 CDD:214531 14/36 (39%)
FXa_inhibition 1211..>1235 CDD:464251 12/28 (43%)

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