DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndg and LOC100485083

DIOPT Version :10

Sequence 1:NP_610575.1 Gene:Ndg / 36089 FlyBaseID:FBgn0026403 Length:1350 Species:Drosophila melanogaster
Sequence 2:XP_031761683.1 Gene:LOC100485083 / 100485083 XenbaseID:XB-GENE-29077611 Length:1015 Species:Xenopus tropicalis


Alignment Length:215 Identity:76/215 - (35%)
Similarity:109/215 - (50%) Gaps:22/215 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GDSETIVLQLEQPIHFYGEQYEQLYINTNGILTFNSEFPEYLNQPFPLEYAS---IAAFYSNVDT 114
            |.||.|  ||...|..:|:.:..|||:|||:::||  .|.|...|..|....   ||.|:::|..
 Frog   451 GASEAI--QLSMNISIFGKSFSSLYIDTNGLISFN--LPIYTYTPAHLPAIGNMFIAPFWADVYN 511

  Fly   115 SFSDEGTSISLFESKEQSILDRASSLVRYAFSSQSEFEARQVIVATWRNVGYFDSKTDRLNTFQV 179
            .|..:   |...||.|.|:|.:|:|.:|..|.:.: |.|:.|.|.||..|.||.|.:.::||||.
 Frog   512 VFQSD---IYYRESTEASLLSQATSDIRRYFHNMN-FSAKWVFVVTWHKVPYFGSSSSKVNTFQA 572

  Fly   180 ALIANEQSTFVQFIYPDGGLNWLQGETAG----LGLPDIRAQAGFVAEDGR---FYTLNGSGSEN 237
            .:..:...|:|.|.|  |.:.|..|..:|    .||..|.|.||.  ..|.   ||.:.||.|.:
 Frog   573 VITTDGNLTYVMFNY--GDIEWTTGTASGGSSVSGLGGIPALAGI--NSGNFTGFYEIPGSMSAS 633

  Fly   238 ARFLSESTNLGVPGVWLFEV 257
            ...|:.::|:|..|.|.|:|
 Frog   634 IINLASTSNVGFSGRWAFQV 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NdgNP_610575.1 NIDO 108..262 CDD:214712 54/157 (34%)
EGF_3 285..320 CDD:463759
G2F 322..549 CDD:214774
EGF_CA 591..622 CDD:429571
EGF_3 797..828 CDD:463759
EGF_3 836..873 CDD:463759
EGF_3 963..995 CDD:463759
EGF_3 1001..1036 CDD:463759
NHL 1074..>1254 CDD:302697
NHL repeat 1074..1112 CDD:271320
LY 1107..1145 CDD:214531
NHL repeat 1117..1156 CDD:271320
LY 1152..1195 CDD:214531
NHL repeat 1161..1202 CDD:271320
NHL repeat 1210..1244 CDD:271320
LOC100485083XP_031761683.1 NIDO 218..352 CDD:470642
NIDO 504..653 CDD:214712 53/156 (34%)
NIDO 738..889 CDD:470642
Blue background indicates that the domain is not in the aligned region.

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