DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNaseZ and rbn

DIOPT Version :10

Sequence 1:NP_724916.1 Gene:RNaseZ / 36086 FlyBaseID:FBgn0028426 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_416771.4 Gene:rbn / 946760 ECOCYCID:G7175 Length:305 Species:Escherichia coli


Alignment Length:324 Identity:90/324 - (27%)
Similarity:139/324 - (42%) Gaps:77/324 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 KIIFLGTGSCIPNKTRNVSSILI---RTAIDAYVLLDCGEGTYGQIVRLYGHEKGQLILRQLQAI 517
            ::|||||.:.:|.:||||::||:   ........|.||||||..|::.. ....|     :|..|
E. coli     2 ELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHT-AFNPG-----KLDKI 60

  Fly   518 YVSHLHADHHIGLIGLLRERRQLKPRADPLILLAPRQIEPWLE--------FYNRQIETVEDAYT 574
            ::||||.||..||.|||.. |.:.....||.:..|:.|..::|        :.:..:|.||    
E. coli    61 FISHLHGDHLFGLPGLLCS-RSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVE---- 120

  Fly   575 LVGNGELL--------ASPLS------GEQVER------LGITSISTCLVRHCP----NSFGISL 615
             :|.||:|        |.||.      |.::|.      |...::....|...|    ...|.::
E. coli   121 -IGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTI 184

  Fly   616 TL-------AAKHNSEPV---KITYSGDTMPCQDLIDLGRDSTVLIHEATMEDDLEEEARLKTHS 670
            ||       .|.:.:.||   .:...|||.||...:||.:...|::||||::..:|.:|..:.||
E. coli   185 TLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHS 249

  Fly   671 TVSQAIQQGRNMNARHTILSHFSQRYAKCPRLPSDEDMQRVAIAFDNMEVTVEDLQHYHKLYPA 734
            :..||....|.......|::|.|.||       .|:..|.:             |:....::||
E. coli   250 STRQAATLAREAGVGKLIITHVSSRY-------DDKGCQHL-------------LRECRSIFPA 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNaseZNP_724916.1 metallo-hydrolase-like_MBL-fold 61..262 CDD:451500
RNaseZ_ELAC1_ELAC2-C-term-like_MBL-fold 457..655 CDD:293804 71/242 (29%)
metallo-hydrolase-like_MBL-fold <623..706 CDD:451500 26/85 (31%)
rbnNP_416771.4 true_RNase_BN 3..305 CDD:131697 90/323 (28%)
Blue background indicates that the domain is not in the aligned region.

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