Sequence 1: | NP_001369075.1 | Gene: | CAP / 36084 | FlyBaseID: | FBgn0033504 | Length: | 2568 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005249549.1 | Gene: | MDC1 / 9656 | HGNCID: | 21163 | Length: | 2110 | Species: | Homo sapiens |
Alignment Length: | 2242 | Identity: | 415/2242 - (18%) |
---|---|---|---|
Similarity: | 672/2242 - (29%) | Gaps: | 795/2242 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 QNENHQQQAEGAEDREEQQDFQTQIAVAQ-----SSSFV----DDNGNS---------------- 69
Fly 70 -GSVSNGPTENSEEVTN------TLEKTEKKEEIF-------EQPATVIQKEADSDAEMGAKNSK 120
Fly 121 HRKEKSDKQASNGKSEEQVRPPPTIIRR--PPGSPRQAKVIVHRIVREEDTANGKAQSPEPPKAV 183
Fly 184 ESKEQHMEVEDSKKEKPEAQQEIETKEERENEP-SPKELPES------------------SHLSE 229
Fly 230 DAQQKHVEVEE------------------NQQVYDEVDYSKDET----TDNNPQQEQHDSKE--P 270
Fly 271 EQYVLQLEKAMEFVENAHQQHVAAVQSYQKQRDTEQNAQQQE---QNEAQHLQESTKAHQQNIAV 332
Fly 333 PQILVDPKKREEGLAQQLHHDVKEEPILNNAQQ--QNDDTAP-----KSPKEVTIKVQFQTEDPY 390
Fly 391 SQQPPPQKPTSKVIIHQIHVETTDEEQNAKPTFEEVSSTTGSLAGTLSPPPRYLVES-------- 447
Fly 448 ---PKNVSSGQFSNFSRNVQIQEMELNSDFSSG--------------EFNSLQSPLVCEVDSESE 495
Fly 496 GS-------VV----LGPERSPSDQ--QVPSSSRVEQH-EQVRQKRAQYRNALESHFMPQLLNPR 546
Fly 547 YLDSILEENEWRNSTASSGGSDQTGIRTPKLNETFPRSQLDFSRRHKRREEAPSPLKLETK---- 607
Fly 608 -----------LLEESTDLES---CTRLQS---ALSP-------QSEDA----ELVYLSSSASSS 644
Fly 645 VSDLMELELEQAAAL----------AERALVDLDTDAS---------------RLIAR-----PD 679
Fly 680 DEMSSTSTTTADRSETEAETETETEREGEQSRESTPVNANPTLASSQSSLLSAATPTPTPTPTPA 744
Fly 745 DREQ------LAKDT---NVSGGSTVSFGAASPLAATREEFVRNMDKVRELIEMTRREQEQGELP 800
Fly 801 RSPSPPPVPPPPASVPPYSPESSSFHLASL----QLKRQESNDSHCSDSTTHSQCTAINLASPPP 861
Fly 862 PPTAQPPTPPLRQKP---------APPPVPQPVSPPAPPT--------PQSEPELSVADSVANAN 909
Fly 910 ADVDADADTDTEAI---KKLRLLCTEQLASMPYGEQVLE--ELASVAQNI----------SDQSQ 959
Fly 960 NKMPYPMPQLPHIKELQLNANESKSSSAWLGLPTQSDPKLLVCLSPGQRDLVNN---------QT 1015
Fly 1016 QPDDLLDAHQKFVERRGYHELSKAQVLEQDHQQQQSEMLKTAAMMRELRKSLSPPAPPVPPPPVP 1080
Fly 1081 VKSAETAAKATAHENAKRDDASEQKQKIAACE---SSSLENKPRRAADLGAQQSAEQRQSSSTTT 1142
Fly 1143 SSHKATTETMSSDTAKFPTLDSMESELARMFPQHKGDIFEEQRKRFSNIEFPSHQPVSQTKRYSN 1207
Fly 1208 IETSSYESKKRMENGQVVYDVSTSSHEKKEQGDPPKDQPVPPVPPPPIMSAT------------- 1259
Fly 1260 -------KLNGNTFIDGDVAPKNSQPSRESGSGSGNGTYEEFRQRAKAAADAFGEQREQQNGLDQ 1317
Fly 1318 DRVFKDFDRLSQQMHAE--LQSTREKREKSASMYDLSGFTRPASGHPRLDELQQRRHAHMQELER 1380
Fly 1381 EIERSAKSRQERMS------SVPRQMEATPPRTHEIPIELEPRSRRA------------ESL--- 1424
Fly 1425 ------------------------CNLN-------EP----PPRPHTTVGHYNHPVVQDDWSR-- 1452
Fly 1453 -----------------YANDL------------------GYSENIARPFAREVEICYQRQNQ-- 1480
Fly 1481 ------------RTPHCIRAPRLSASTNDLSSSSQYSYDTFNAYGGRRTHAPMLNQAQQQQRPHY 1533
Fly 1534 GS-----CYSMIERDPNPRYISTTSRRGVSPAPPPVATPQQQQVPPPAYDRQQRRSSLPRELHEQ 1593
Fly 1594 QLKYILSKEEELKFEVERLQQERRRLMEEMQRAPVLPAPQR----------RESYRPAAKLPTLS 1648
Fly 1649 EDEVF------RQQMAEEWMNKVAEREERRQH--------KIIRISKIE---------------- 1683
Fly 1684 --DEHDHSAVDKATISDEFLDRVKERRHKLSMPADSDW-----ESGAESQPQPAAQSQPESD--- 1738
Fly 1739 --------VEAPPVRILEG---QAEANLRQLPRHLREFAKFSTSEQLPDGAQMERHEEQERREEA 1792
Fly 1793 TDNAHSSATKKTSIVKTYKVSRLPPSVQGEFP 1824 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CAP | NP_001369075.1 | MDN1 | <43..328 | CDD:227596 | 75/371 (20%) |
Sorb | 1959..2003 | CDD:413404 | |||
SH3_Sorbs_1 | 2315..2367 | CDD:212715 | |||
SH3_Sorbs_2 | 2384..2436 | CDD:212716 | |||
SH3_Sorbs_3 | 2514..2567 | CDD:212714 | |||
MDC1 | XP_005249549.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |