DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and YSC84

DIOPT Version :10

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:NP_011880.1 Gene:YSC84 / 856409 SGDID:S000001058 Length:468 Species:Saccharomyces cerevisiae


Alignment Length:383 Identity:85/383 - (22%)
Similarity:139/383 - (36%) Gaps:96/383 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  2059 LNQDEKL-----YGTMP---NPIKSAQNSYKNQPGRIENYTTGHSSVSEKEKKEWWDEVMDIFNG 2115
            ||.:|.:     :||:.   |...||....::........|.|.|:|....|.:      .:|.|
Yeast   107 LNSEEAVRSFSEFGTITLGGNVSVSAGPLGRSAEAAASASTGGVSAVFAYSKSK------GLFAG 165

  Fly  2116 -NLEQSKLSPLYTEGNLSRALAKESGY----TSDSNLVFRKKEVPVSSPLSPVEQKQAYKSLQAG 2175
             ::|.|.:        |.|..|....|    ||...|..|.|..|.:.||..:.:.:|:...:..
Yeast   166 VSVEGSAI--------LERREANRKFYGDNCTSKMILSGRVKVPPAADPLLRILESRAFNFTRHD 222

  Fly  2176 GEPPLLG---------------FRKPAPEKPRDLDPNAP-PIPPQPPVKGL-----SSYDFPYST 2219
            .:....|               :....|:.....|.::. |.......:|:     |.||..|..
Yeast   223 HDDNASGDDFYDDGQYSDNTSHYYDDIPDSFDSTDESSTRPNTRSSRRRGMSLGSRSRYDDDYDD 287

  Fly  2220 D---------TVDGSDVNIHF-KTPIRHEQR--------------QNLSEEELAIRQAE-----H 2255
            |         ..|..|.:..: ::|.|:..|              ....|::|..|..|     |
Yeast   288 DGYGRGRGYGDFDSEDEDYDYGRSPNRNSSRNRGPQIDRGTKPRANTRWEDDLYDRDTEYSRPNH 352

  Fly  2256 MQKLYHEER--RRKYLQELQDMNSRRHTDNFTPSQKSPIALNRYDDFPTDVTLKSLVGPKT---- 2314
            ..:.|...|  ||.|.:|      |.::....|:.  |..::..||....::...|....|    
Yeast   353 SGRDYDNTRGNRRGYGRE------RGYSLGHGPTH--PSNMSNVDDLSHKMSKTGLGNESTATNS 409

  Fly  2315 ---VARALFNFQGQTSKELSFRKGDTIYIRRQIDA--NWYEGEHNAMIGLLPASYVEI 2367
               .|.||:||.|:...:|:|:|||.|.|.::.|:  :|:.|..|...|:.||:||.:
Yeast   410 ATPTAVALYNFAGEQPGDLAFKKGDVITILKKSDSQNDWWTGRTNGKEGIFPANYVRV 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 Sorb 1959..2003 CDD:470634
SH3_Sorbs_1 2315..2367 CDD:212715 22/53 (42%)
SH3_Sorbs_2 2384..2436 CDD:212716
SH3_Sorbs_3 2514..2567 CDD:212714
YSC84NP_011880.1 SYLF_SH3YL1_like 13..213 CDD:211401 29/119 (24%)
SH3_Ysc84p_like 413..467 CDD:212776 22/53 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.