DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and SORBS2

DIOPT Version :10

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:NP_001382136.1 Gene:SORBS2 / 8470 HGNCID:24098 Length:1300 Species:Homo sapiens


Alignment Length:1288 Identity:312/1288 - (24%)
Similarity:454/1288 - (35%) Gaps:432/1288 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1506 YDTFNAYGGRRTHAPMLNQAQ-----QQQRPHYGSCYSMIERDPNPRYISTTSRRGVSPAPPPVA 1565
            |:|...|.....:.|...|:.     |..||     .|....|.:|......|    ||.|||  
Human   218 YNTPYTYNAGLYNPPYSAQSHPAAKTQTYRP-----LSKSHSDNSPNAFKDAS----SPVPPP-- 271

  Fly  1566 TPQQQQVPPPAYD-RQQRRSSLPRELHEQQLKYILSKEEELKFEVERLQQERRRLME-------- 1621
                 .||||... |.:.|||  .|.|:..       ..:.|.:..:.:.|.|.:.|        
Human   272 -----HVPPPVPPLRPRDRSS--TEKHDWD-------PPDRKVDTRKFRSEPRSIFEYEPGKSSI 322

  Fly  1622 -EMQRAPVLPA----------------------------PQRRESYRPAAKLPTLS--------E 1649
             :.:|.|.||.                            |.|..:..|:::.|.||        .
Human   323 LQHERPPPLPTTPTPVPREPGRKPLSSSRLGEVTGSPSPPPRSGAPTPSSRAPALSPTRTDRINP 387

  Fly  1650 DEVFRQQMAEEWMNKVAEREERRQHKIIRISKIEDEHDHSAVDKATISDEFLDRVKERRHKLSMP 1714
            |::..:.  |.|....:|.|..|......:..::| |.....::|::....:||..||....:..
Human   388 DDIDLEN--EPWYKFFSELEFGRPPPKKPLDYVQD-HSSGVFNEASLYQSSIDRSLERPMSSASM 449

  Fly  1715 ADSDWESGAESQPQ--PAAQSQPESDVEAPPVRILEGQAEANLRQLPRHLREFAKFSTSEQLPDG 1777
            | ||:....:|:|.  |......:|.....|.|:          .||.......|..||..    
Human   450 A-SDFRKRRKSEPAVGPPRGLGDQSASRTSPGRV----------DLPGSSTTLTKSFTSSS---- 499

  Fly  1778 AQMERHEEQERREEATDNA------------HSSATKKTSIVKTYKVSRLPPSVQGEFPGQFSGG 1830
                  .....|.:..|::            :.:.:.:.....||   |....|..:.|...|..
Human   500 ------PSSPSRAKGGDDSKICPSLCSYSGLNGNPSSELDYCSTY---RQHLDVPRDSPRAISFK 555

  Fly  1831 NRGRLYRER----SQTARLVSHNIPLELTSNHSSSPDSDFNPGCGSSPAPGSSTQSSIPSLVQSP 1891
            |..::.|:.    |.|...||..|       .|.|.|...|..|.|.|.|...::|....|.:..
Human   556 NGWQMARQNAEIWSSTEETVSPKI-------KSRSCDDLLNDDCDSFPDPKVKSESMGSLLCEED 613

  Fly  1892 TPAPPP-----PIEP----------LNPSSSTAGGILGTALLLGLSLLTAWNKFIYKVKH----- 1936
            :....|     |..|          .:.|:..|.|.|.                :||..|     
Human   614 SKESCPMAWGSPYVPEVRSNGRSRIRHRSARNAPGFLK----------------MYKKMHRINRK 662

  Fly  1937 ----------------EYMSEPETGSDRPRKMAQLGRRQYDGIGPVTNDGMPIILRSEVKEPHQH 1985
                            :|.|| :...|..|..:|....:      |..|.:|    :.:.|    
Human   663 DLMNSEVICSVKSRILQYESE-QQHKDLLRAWSQCSTEE------VPRDMVP----TRISE---- 712

  Fly  1986 EWYKRLYQTIHKQKN-GDD-------------------FVIRYKC---------PRARPSYKSNG 2021
              :::|.|......| |||                   |.|.|..         .|.|...:||.
Human   713 --FEKLIQKSKSMPNLGDDMLSPVTLEPPQNGLCPKRRFSIEYLLEEENQSGPPARGRRGCQSNA 775

  Fly  2022 YV-------SEPEPN-----YDSDYSTVRYRTQNPHRVQSVSSAVNVR-------------NLNQ 2061
            .|       |:.:|.     .|||...|         |...|..:::.             :...
Human   776 LVPIHIEVTSDEQPRAHVEFSDSDQDGV---------VSDHSDYIHLEGSSFCSESDFDHFSFTS 831

  Fly  2062 DEKLYGTMPNP-----------IKSAQN----SYKNQPGRIENYTTGHSSVSEKEKKEWWDEVMD 2111
            .|..||:..:.           |.|.:.    ||......:::....|.:..|..::|     ||
Human   832 SESFYGSSHHHHHHHHHHHRHLISSCKGRCPASYTRFTTMLKHERARHENTEEPRRQE-----MD 891

  Fly  2112 IFNGNL---------------------EQSKLSPLYTEGNLSRAL---------AKESGYTSDSN 2146
            .....|                     |::|......|. |..||         .|:.|...|::
Human   892 PGLSKLAFLVSPVPFRRKKNSAPKKQTEKAKCKASVFEA-LDSALKDICDQIKAEKKRGSLPDNS 955

  Fly  2147 LVFRKKEVPVSSPLSPVEQKQAYKSLQAGGEPPLLGFRKPAPEKPRDLDPNAPPIPPQPPVKGLS 2211
            ::.|.    :|..|..|.::.:  ||:|....||                 ..|:.|.||...: 
Human   956 ILHRL----ISELLPDVPERNS--SLRALRRSPL-----------------HQPLHPLPPDGAI- 996

  Fly  2212 SYDFPYSTD-----------TVDGSDVNIHFKTPIRHEQRQNLSEEELAIRQAEHMQKLYHEERR 2265
             :..||..|           .||.::.:.|      |:.|..               .|...|..
Human   997 -HCPPYQNDCGRMPRSASFQDVDTANSSCH------HQDRGG---------------ALQDRESP 1039

  Fly  2266 RKYLQELQDM-NSRRHTDNFTPSQKSPIALNRYDDFPTDVTLKSLVGPKTVARALFNFQGQTSKE 2329
            |.|...|.|| .|.......||.::                       |..|:|:::|:.|||||
Human  1040 RSYSSTLTDMGRSAPRERRGTPEKE-----------------------KLPAKAVYDFKAQTSKE 1081

  Fly  2330 LSFRKGDTIYIRRQIDANWYEGEHNAMIGLLPASYVEIVSRDGARTPSK-----RPSE-GQARAK 2388
            |||:||||:||.|:||.|||||||:..:|:.|.||||.::......|::     :|.| |:|.||
Human  1082 LSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPAQPGEIGEAIAK 1146

  Fly  2389 YNFQAQSGIELSLNKGELVTLTRRVDGNWFEGKI--ANRKGIFPCSYVEVL--TDIGAEDIAART 2449
            |||.|.:.:||||.||:.|.|.:|||.||:||||  .||:||||.|||||:  ...||||.    
Human  1147 YNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDY---- 1207

  Fly  2450 TTVITSQSTTNLRPNLDVLRTNINNEFNTLTQNGAQPPNGILKETRTLHKTDALHVDTSSEPLAY 2514
                         |:..:..:..::..::|:.|..|.|       ...|:    ::....||  :
Human  1208 -------------PDPPIPHSYSSDRIHSLSSNKPQRP-------VFTHE----NIQGGGEP--F 1246

  Fly  2515 RALYKYRPQNSDELELLEGDVVHVLEKCDDGWFVGTSQRTGCFGTFPGNYVER 2567
            :|||.|.|:|.|||||.|.||:.|:||||||||||||:||..|||||||||:|
Human  1247 QALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 Sorb 1959..2003 CDD:470634 8/44 (18%)
SH3_Sorbs_1 2315..2367 CDD:212715 32/51 (63%)
SH3_Sorbs_2 2384..2436 CDD:212716 33/53 (62%)
SH3_Sorbs_3 2514..2567 CDD:212714 38/52 (73%)
SORBS2NP_001382136.1 Sorb 170..214 CDD:460492
SH3_Sorbs2_1 1066..1120 CDD:212853 33/53 (62%)
SH3_Sorbs2_2 1141..1197 CDD:212856 35/55 (64%)
SH3_Sorbs2_3 1240..1300 CDD:212850 41/62 (66%)
Blue background indicates that the domain is not in the aligned region.

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