DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and AT1G31440

DIOPT Version :9

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:NP_174429.1 Gene:AT1G31440 / 840034 AraportID:AT1G31440 Length:439 Species:Arabidopsis thaliana


Alignment Length:517 Identity:104/517 - (20%)
Similarity:187/517 - (36%) Gaps:131/517 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1950 RKMA-----QLGRRQ---YDGIGPVTNDGMPIILRSEVKEPHQHEWYKRLYQTIHKQKNGDDFVI 2006
            ||.|     |:.|:|   ...:|.|..|.:.:    :.:|.|.|:..:.||.:....|.     :
plant     5 RKQAAKLREQVARQQQAVLKHLGHVNADAVVV----DEEELHCHQKLQDLYSSTKAAKR-----L 60

  Fly  2007 RYKCPRARPSYKSNG-YVSEPEPNYDSDYSTVRYRTQNP-----------HRVQSVSSAVNVRNL 2059
            :....|....:.:.| .|.|....:..|:.  :|..:||           |...|..|....|  
plant    61 QRNIVRGLEGFIATGTKVVEIGLKFAEDFK--KYGDENPDANTPLSRVAHHFGTSYKSVEGER-- 121

  Fly  2060 NQDEKLYGTMP----NPIKSAQNSYKNQPGR--IENYTTGHSSVSEKEKKEWWDEVMDIFNGNLE 2118
               |.|.|.:.    .||::...|...:..|  :.:|        ::.::|...:..|:..   .
plant   122 ---ETLLGVLSEQVCEPIRTMIYSAPLEDARHLVNHY--------DRLRQEVEAQATDVLR---R 172

  Fly  2119 QSKLSPLYTEGNLSRALAKESGYTSDSNLVFRKKEVPVSSPLSPVEQKQAYKSLQAGGEPPLLGF 2183
            :|||              |||..:.::.:..:..|..::      |.|.:.|:|           
plant   173 RSKL--------------KESDISEEAYIKLKNSESRLA------ELKSSMKTL----------- 206

  Fly  2184 RKPAPEKPRDLDPNAPPIPPQPPVKGLSSYDFPYSTDTVDGSDVNIHFKTPIRHEQRQNLSEEEL 2248
            .|.|.:...::|.....:..| .::.|...:..|..:.:|..| .:|         .:.::||| 
plant   207 GKEATKAMLEVDDQQQNVTSQ-RLRALVEAERSYHRNALDILD-KLH---------SEMIAEEE- 259

  Fly  2249 AIRQAEHMQKLYHEERRRKYLQELQDMNSRRHTDN----FTPSQKSPIALNRYDDFPTDVTLKSL 2309
            ||..:.....|:.|:......||....:|.....|    ...|::..|..|     |.:||..| 
plant   260 AIGSSPKSLPLHIEDSASLPQQEPNSNSSGEIKSNPLGKIKASRREEIKSN-----PQEVTKPS- 318

  Fly  2310 VGPKTVARALFNFQGQTSKELSFRKGDTIYIRRQIDANWYEGEHNAMIGLLPASYVEIVSRDGAR 2374
              ||...::....:.:::.:...:......|::   :|..:..||..:                 
plant   319 --PKDEMKSSPQEETKSNHQKEIKSSPQEEIKK---SNGSDDHHNHQL----------------- 361

  Fly  2375 TPSKRPSEGQARAKYNFQAQSGIELSLNKGELVTLTRRVDG-NWFEGKIANRKGIFPCSYVE 2435
             .|:..|...|:..:.|.||:..||||...:.| :.|:|.| .|.||:...:.|.||.:|||
plant   362 -LSQNDSYFLAKVVHPFDAQAPGELSLAVDDYV-IVRQVAGTGWSEGEYKGKAGWFPSAYVE 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 MDN1 <43..328 CDD:227596
Sorb 1959..2003 CDD:413404 10/46 (22%)
SH3_Sorbs_1 2315..2367 CDD:212715 4/51 (8%)
SH3_Sorbs_2 2384..2436 CDD:212716 21/53 (40%)
SH3_Sorbs_3 2514..2567 CDD:212714
AT1G31440NP_174429.1 BAR_SH3P_plant 45..253 CDD:153291 45/272 (17%)
SH3 370..422 CDD:302595 21/53 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14167
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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