DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CAP and AT4G34660

DIOPT Version :9

Sequence 1:	NP_001369075.1	Gene:	CAP / 36084	FlyBaseID:	FBgn0033504	Length:	2568	Species:	Drosophila melanogaster
Sequence 2:	NP_567969.1	Gene:	AT4G34660 / 829618	AraportID:	AT4G34660	Length:	368	Species:	Arabidopsis thaliana

Alignment Length:	398	Identity:	91/398 - (22%)
Similarity:	149/398 - (37%)	Gaps:	122/398 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly  2038 RYRTQNPHRVQSV----------SSAVNVRNLNQD---EKLYGTMPNPIKSAQNSYKNQPGRIEN 2089
            |.|.|...:.|:|          |...:...|||.   ||||.:    .::|::..::....:|.
plant    10 RLREQVARQQQAVFKQFGGGGYGSGLADEAELNQHQKLEKLYIS----TRAAKHYQRDIVRGVEG 70

  Fly  2090 Y-TTGHSSV------SEKEKKEWWDEVMDIFNGN-LEQSKLSPLYTEGNLSRALA---KESGYTS 2143
            | .||...|      ||..:|  :.......||| |.::.|       |..||.|   ||.|
plant    71 YIVTGSKQVEIGTKLSEDSRK--YGSENTCTNGNVLTRAAL-------NYGRARAQMEKERG--- 123

  Fly  2144 DSNLVFRKKEVPVSSPL------SPVE------------------------QKQAYKSLQAGGEP 2178
              |:: :.....|:.||      :|:|                        ::|| |:.::.|.|
plant   124 --NML-KALGTQVAEPLRAMVLGAPLEDARHLAQRYDRMRQEAEAQATEVARRQA-KARESQGNP 184

  Fly  2179 PLLGFRKPAPEKPRDLDPNAPPIPPQPPVKGLSSYDFPYSTDTVDGSDVNIHFKTPIRHEQRQNL 2243
            .:|...:.|..|..||..|. .|..:.....|:|.:                       :|:|.|
plant   185 DILMKLESAEAKLHDLKSNM-TILGKEAASALASVE-----------------------DQQQKL 225

  Fly  2244 SEEELAIRQAEHMQKLYHEERRRKYLQELQ-DMNSRRH----------TDNFTP----SQKSPIA 2293
            :.|.| :...| .::.|| :|..:.|.:|: :|.|.|.          .|:..|    .:.:.:.
plant   226 TLERL-LSMVE-SERAYH-QRVLQILDQLEGEMVSERQRIEAPSTPSSADSMPPPPSYEEANGVF 287

  Fly  2294 LNRYDDFPTDVTLKSLVGPKTVARALFNFQGQTSKELSFRKGDTIYIRRQIDANWYEGEHNAMIG 2358
            .::..|..|| ::...:|     ..||.:.|.|..|||...|:.:.:|:...:.|.|||.....|
plant   288 ASQMHDTSTD-SMGYFLG-----EVLFPYHGVTDVELSLSTGEYVVVRKVTGSGWAEGECKGKAG 346

  Fly  2359 LLPASYVE 2366
            ..|..|:|
plant   347 WFPYGYIE 354

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CAP	NP_001369075.1	MDN1	<43..328	CDD:227596
		Sorb	1959..2003	CDD:413404
		SH3_Sorbs_1	2315..2367	CDD:212715	17/52 (33%)
		SH3_Sorbs_2	2384..2436	CDD:212716
		SH3_Sorbs_3	2514..2567	CDD:212714
AT4G34660	NP_567969.1	BAR_SH3P_plant	45..254	CDD:153291	56/255 (22%)
AT4G34660	NP_567969.1	SH3	303..354	CDD:418401	17/55 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR14167
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100