DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAP and AT4G18060

DIOPT Version :9

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:NP_193540.3 Gene:AT4G18060 / 827531 AraportID:AT4G18060 Length:351 Species:Arabidopsis thaliana


Alignment Length:419 Identity:74/419 - (17%)
Similarity:142/419 - (33%) Gaps:116/419 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1958 RQYDGIGPVTNDGMPIILRSEVKEPHQHEWYKRLYQTIHKQKNGDDFVIRYKCPRARPSYKSNGY 2022
            :|:.|.|..::|.| :|...|::..||.:   :||::....|.....::     :|..::.:.| 
plant    24 KQFSGTGYESSDVM-VIDELEMQRHHQLD---KLYRSTRSAKEFQRDIV-----KAAEAFTTIG- 78

  Fly  2023 VSEPEPNYDSDYSTVRYRTQNPHRVQSVSSAVNVRNLNQDEKLYGTMPNPIKSAQNSYKNQPGRI 2087
            :...|..........||..:|...:..     |:  |.:...:||.....:...|..:       
plant    79 LRHIEAGTKLSEDCCRYGNENSQNIDE-----NI--LAKAAAIYGDARKHVDKEQEDF------- 129

  Fly  2088 ENYTTGHSSVSEKEKKEWWDEVMDIFNGNLEQSKLSPLYTEGNLSRALAK-----ESGYTSDSNL 2147
                          .|....:|:|.....:..   |||....:|::..::     |:..|..|..
plant   130 --------------NKLLASQVLDPLRAMVAG---SPLEDARHLAQRYSRMRQEAETHATEVSRR 177

  Fly  2148 VFRKKEVPVSSPLSPVEQKQAYKSLQAGGEPPLLGFRKPAPEKPRDLDPNAPPIPPQPPVKGLSS 2212
            ..|.:|.|:...::.::..:|                     |.::|..|.              
plant   178 QARVREAPIPENVAKLQLAEA---------------------KMQELKANM-------------- 207

  Fly  2213 YDFPYSTDTVDGSDVNIHFKTPIRHEQRQNLSEEELAIRQAEHMQKLYHEERRRKYLQELQD--M 2275
                    .|.|.:..... ..:..:|.:...:..:|:.:.|   |.|| .|....|.:::.  :
plant   208 --------AVLGKEATAAL-AAVESQQHRLTFQRLVAMVEGE---KNYH-LRIAAILSDIEAEMV 259

  Fly  2276 NSRRHTDNFTPSQKSPIALNRYDDFPTDVTLKSLVGPKT---VARALFNFQGQTSKELSFRKGDT 2337
            ..::|.::..|:            .||:..     ..||   :|..:..|...:.|||...|||.
plant   260 TEKQHKESAPPA------------IPTENG-----SEKTSYFLAEVIHPFSAASEKELDLDKGDY 307

  Fly  2338 IYIRRQIDANWYEGEHNAMIGLLPASYVE 2366
            |.:|:.....|.|||.....|..|.:|:|
plant   308 IVVRKVSQTGWAEGECKGKAGWFPMAYIE 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 MDN1 <43..328 CDD:227596
Sorb 1959..2003 CDD:413404 12/43 (28%)
SH3_Sorbs_1 2315..2367 CDD:212715 18/52 (35%)
SH3_Sorbs_2 2384..2436 CDD:212716
SH3_Sorbs_3 2514..2567 CDD:212714
AT4G18060NP_193540.3 BAR 49..257 CDD:416402 42/295 (14%)
SH3 285..337 CDD:418401 18/52 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14167
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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