DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and sorbs2b

DIOPT Version :9

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:XP_009289432.1 Gene:sorbs2b / 563408 ZFINID:ZDB-GENE-070308-3 Length:1822 Species:Danio rerio


Alignment Length:2042 Identity:391/2042 - (19%)
Similarity:617/2042 - (30%) Gaps:826/2042 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1107 KIAACESSSLENKPRRAADLGAQQSAEQRQSSSTTTSSHKATTETMSSDTAKFPTLDSMESELAR 1171
            :|..|.:.||...|.:.    .|.|......:.:.:.|..:.....||.|......|...|.||.
Zfish    25 QIRKCATLSLTLTPMKR----IQSSPNLYSLTDSESQSRDSDLWRPSSSTDGLRNGDVCSSSLAA 85

  Fly  1172 MFPQHKGDIFEEQRK----RFSNIE----FPSHQPVSQTKRYSNIETSSYESKKRMENGQVVYDV 1228
            ...:....||:|::.    :..|:.    .|:...:|...:.|:::..|.|.::.:        .
Zfish    86 KGYRSVRPIFQEKKSPTPAQEQNVHTLSLMPTQDQISGFSQQSHLQPPSRELERHV--------A 142

  Fly  1229 STSSH--------------------------EKKEQGD---PPKDQPVPPVPPPPIMSATKLNGN 1264
            |.|.|                          :::::|.   ||.....||||..|::......|.
Zfish   143 SLSIHIHPRPQISGPRTQAMSLRPPTPPKRMDRQDRGSHQCPPLPSAAPPVPEVPVLLKQSYPGT 207

  Fly  1265 T-----------FIDGDV-APKN-SQPSRESG---SGSGNGTYEEFRQRAKAAADAF-----GEQ 1308
            .           ||..:. :|.. ..|.|.|.   |.:.....||.|        .|     |..
Zfish   208 AQSHNRLRLSLDFIRPETFSPAGPHSPDRCSSCTQSEASTAVLEELR--------GFGLGPEGGS 264

  Fly  1309 REQQNGLDQDRVFKDFDRLSQQMHAELQST--------------REKREKSASMYDLSGFTRPAS 1359
            |.....|.|..|..|    |..:|:...|.              ...|......:..|.:..|.|
Zfish   265 RTPSPTLSQMSVVTD----SMGLHSRAASNINGQMTVNGGLSVPASPRSHIQRPFSPSTYPPPPS 325

  Fly  1360 GHPRLDELQQ--RRHAHMQELEREIERSAKS----RQERMSSVPRQMEATPPRTHEIPIELEPRS 1418
            ..|.:..:||  |..|....:...::..|::    |:|.....|......|.....|||.:....
Zfish   326 LSPSITAMQQQARTTASSTPIYANVDPPARAPHTDRRETAGKAPHYTGIGPVDESGIPIAIRTSV 390

  Fly  1419 RRAESLCNLNEPPPRPHTTVGHYNH--PVVQDDW--SRYANDLGYSENIARPFAREVEICYQRQN 1479
            .|          |...:.|:....|  |..:.:|  ||.|.|         |.........::..
Zfish   391 DR----------PKDWYKTMFKQIHVVPKTEIEWSGSRTATD---------PVTSPATTTSKQDK 436

  Fly  1480 QRTPHCIRA-PRLSAST-----NDLSSSSQYSYDTFNAYGGRRTHAPMLNQAQQQQRPHYGSCYS 1538
            |..|:.::| |....||     ..:|.:..|::....|       :|:......||||       
Zfish   437 QAAPNAVQAHPAPKTSTYRPISKSVSDNGIYAFRLPVA-------SPLPTSTSTQQRP------- 487

  Fly  1539 MIERDPNPRYISTTSRRGVSPAPPPVATPQQQQVPPPAYDRQQRRSSLPRELHEQQLKYILSKEE 1603
             |||:...|..||.......|....|.|.:.:..|...:|.:..:||:   |.:::.|..||.| 
Zfish   488 -IEREAPQRGRSTPDMNEWGPPDRKVDTRKYRAEPRSIFDYEPGKSSV---LEQERAKSNLSPE- 547

  Fly  1604 ELKFEVERLQQERRRLMEEMQRAPVLPAPQRRESYRP--AAKLPT------LSEDEVFRQQMAEE 1660
                :::...:...:...|::..  .|.|::...|.|  |.:.|.      .|.|..|.:..:..
Zfish   548 ----DIDLENEPWYKFFAELEFG--RPPPKKLLDYNPESAPRFPVETSLYQPSTDRSFERPSSSA 606

  Fly  1661 WMNKVAEREE-----RRQHKII-------------------------------------RISKIE 1683
            ..||...:.|     .|.|..:                                     .:|.:.
Zfish   607 SDNKKRRKSEPATTQPRAHSSVGTTQTSVRPPELPRGSSTQRNPLTSPSSPATTRTKGGDVSNMH 671

  Fly  1684 DEHDHSAVDKATISDEFLDRVKERRHK-LSMPADSDWESGAESQPQ---PAAQSQPE---SDVEA 1741
            ..|.:......:.|:.......|.... :::||.|:   |..|.|:   ||.::..:   ::..:
Zfish   672 TAHSNCLSPNHSTSEPVYQNYGENEDSFMAVPAVSE---GFSSLPEGWKPAQENSEDWMIAEETS 733

  Fly  1742 PPVR-------ILEGQAEANLRQLPRHLREFAKFSTSEQLPDGAQMERHEEQERREEATDNAHSS 1799
            |.::       :.||:.    |::............:.:|......:..|.::.||.   ..|.|
Zfish   734 PKLKSWSCDDLLSEGRG----REVQTRCESTGSLLHNGELETSQYCDVQESEDLRER---TRHRS 791

  Fly  1800 ATKKTSIVKTYKV-----------SRLPPSVQGEFPGQFSGGNRGRLYRERSQTARLV-----SH 1848
            |......:|.||.           |.:..||:          :|.|.|....:..|..     :.
Zfish   792 AHDAPGFLKLYKKMHHINRQELINSTVICSVK----------SRIRKYESEQRKDRRTGNKGCNE 846

  Fly  1849 NIPLELTSNHSSSPDS---------DFNPGC---GSSPAPGSSTQS-SIPSLVQSPTPA-PPPPI 1899
            .:|.::..|..|..:|         :....|   |||....|..:| ||.||:....|| .||..
Zfish   847 EVPRDMVHNRISEFESLIQKSKSMPNLGEECLIRGSSRRINSPKRSLSIESLLDEEPPARNPPEG 911

  Fly  1900 EPLNPSSS---------TAGGILGTALLLGLS------LLTAWNKFIYKVKHEYMSEPETGSDRP 1949
            .|..|..:         |:..:..:|:....|      :::..:.||......:.||        
Zfish   912 RPQYPKINNHVPIHIHVTSDQLQNSAMQNDYSDSEHDAVVSDLSDFIQIEGSSFCSE-------- 968

  Fly  1950 RKMAQLGRRQYDGIGPVTNDGMPIILRSEVKEPHQHEWYKRLYQTIHKQKNGDDFVIRYKCP--- 2011
                    |::|.....:::       |.....|.|.::::|..:           .:.:||   
Zfish   969 --------REFDLCSFASSE-------SFCGSGHHHHFHRQLVSS-----------CKGRCPASY 1007

  Fly  2012 ----------RARPSYKSNGYVSEPEPNYDSDYSTVRYR---TQNPHRVQSVSSAVNVRNLNQDE 2063
                      ||:...:.:..|.      ||::...:..   :..|.|.:::|.....|..|...
Zfish  1008 TRFTTMIKHERAKQDRRQHLRVE------DSEFGLSKLAFLVSPVPFRRKNLSPLSFSRMSNSKS 1066

  Fly  2064 KLYGTMPNPIKSAQNSYKNQPGRIENYTTGHSSVSEKEKKEWWDEVMDIFNGNLEQ--SKLSPLY 2126
            .:|.|:.:.:|...:..:.:..|        ||:||              |..|.:  .:|.|..
Zfish  1067 YVYETLDSALKDIYDHIRTEKRR--------SSLSE--------------NSILHRLLVELLPDI 1109

  Fly  2127 TEGNLS-RALAKESGYTSDSNLVFRKKEVPVSSPLSPVEQKQAYKSLQAGGEPPLLGFRKPAPEK 2190
            .|.|.| .||.:.                      ||..|.::|.                    
Zfish  1110 PERNSSLHALGRN----------------------SPTIQPRSYH-------------------- 1132

  Fly  2191 PRDLDPNAPPIPPQPPVKGLSSYDFPYSTDTVDGSDVNIHFKTPIRHEQRQNLSEEELAIRQAEH 2255
                        |||  .|:||.|...|.        ..|    :.|....|            |
Zfish  1133 ------------PQP--DGMSSQDIHQSE--------YCH----LSHSASHN------------H 1159

  Fly  2256 MQKLYHEERRRKYLQELQDMNSRRHTDNFT---PSQKSPIALNRYDDFPTDVTLKSLVGPKTVAR 2317
            :.. .:.:|...:....||.::.|   |:|   ..:::|.:..:..|          |..|..||
Zfish  1160 IDS-NNNQRNHNFKYCYQDQDTSR---NYTYPDVGRQTPQSRRQTPD----------VREKLPAR 1210

  Fly  2318 ALFNFQGQTSKELSFRKGDTIYIRRQIDANWYEGEHNAMIGLLPASYVEIVSRDGARTPSKRPSE 2382
            |:::|:.||:|||:|:||||:||.||||.||||||::..:|:.|.||||.:.......|::.|..
Zfish  1211 AIYDFKAQTAKELTFKKGDTVYISRQIDNNWYEGEYHGHVGIFPISYVEKIPPSERHLPARPPPP 1275

  Fly  2383 ------GQARAKYNFQAQSGIELSLNKGELVTLTRRVDGNWFEGKI--ANRKGIFPCSYVEVL-- 2437
                  |:|.|:|||.|.:.:||||.|||.|.|.|:||.|||||||  .|::||||.|||:|:  
Zfish  1276 AQSKEIGEAVARYNFNADTNVELSLRKGERVVLVRQVDKNWFEGKIPGTNKQGIFPVSYVDVIKK 1340

  Fly  2438 ---------------TDIGAEDIAARTTT-----------------------------VITSQ-- 2456
                           |...::.:.:|.::                             .|||:  
Zfish  1341 TSVQNTGQPPGPSIPTSFSSDRLNSRPSSTRNLHNSPSPTIRPLSSSSPSPQRAAHLQAITSEWL 1405

  Fly  2457 -STTNLRPN-------------------------------------------------------- 2464
             .|..|.|:                                                        
Zfish  1406 ALTLGLSPSGTPAPTPPPFPSNFQPYYEAFDSGISPSPASSTLGRSPTLTPRVSTPALKEGHFIP 1470

  Fly  2465 ----------------------------------------------------------------- 2464
                                                                             
Zfish  1471 ISSPKSYMSPDPSPSPQPYLTSASFTPSPTSPTFDSRSGSVIEILSSHKADLPVKELQLFSDPKD 1535

  Fly  2465 ---------------------------LDVL---------------------------------- 2468
                                       ||:|                                  
Zfish  1536 RYKPGETDSPKLGSPIDLVVFEGQKSPLDILPPKDLEDDLCEELVSIIKASQSKGAFLEEEDLYH 1600

  Fly  2469 ----------------RTNINNEF-------NTLT------------------QNGAQPPNGILK 2492
                            ..|.:|.|       ||.|                  || |.|....|.
Zfish  1601 QEPDTVEKLPRLFIEEEQNEDNSFLNKTLPSNTFTPLQLAHSEGSDIEQGEVSQN-ASPRLSPLS 1664

  Fly  2493 ETRTLHKTDALHVDTS------------------------------------------------- 2508
            ...:|..|.|.:..||                                                 
Zfish  1665 SQMSLPFTSAKYSPTSPCSTPPLPGVSQSPPHLAKLFPRQDLRSPKVKPVLRRDVVVVGKPPRSP 1729

  Fly  2509 ----------------------------SEPL-----AYRALYKYRPQNSDELELLEGDVVHVLE 2540
                                        .:||     .::|||.|.|:|.|||||.|||||.|:|
Zfish  1730 VMSRRSCGSPVRGQNFSPSNRSQRQAYACDPLQGGGEPFQALYNYMPRNEDELELKEGDVVDVME 1794

  Fly  2541 KCDDGWFVGTSQRTGCFGTFPGNYVER 2567
            |||||||||||:||..|||||||||:|
Zfish  1795 KCDDGWFVGTSRRTKFFGTFPGNYVKR 1821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 MDN1 <43..328 CDD:227596
Sorb 1959..2003 CDD:413404 5/43 (12%)
SH3_Sorbs_1 2315..2367 CDD:212715 31/51 (61%)
SH3_Sorbs_2 2384..2436 CDD:212716 33/53 (62%)
SH3_Sorbs_3 2514..2567 CDD:212714 40/52 (77%)
sorbs2bXP_009289432.1 Atrophin-1 <150..607 CDD:331285 99/512 (19%)
Sorb 369..411 CDD:308043 10/51 (20%)
SH3_Sorbs2_1 1207..1261 CDD:212853 32/53 (60%)
SH3_Sorbs2_2 1282..1338 CDD:212856 34/55 (62%)
SH3_Sorbs2_3 1762..1822 CDD:212850 41/60 (68%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7576
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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