DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and NCF2

DIOPT Version :9

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:NP_000424.2 Gene:NCF2 / 4688 HGNCID:7661 Length:526 Species:Homo sapiens


Alignment Length:418 Identity:90/418 - (21%)
Similarity:158/418 - (37%) Gaps:110/418 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  2228 NIHFKTPIRHEQRQNLSEEELAI-----RQAEH-----------MQKLYH------------EER 2264
            ||.|....:.|.::  :||:||:     .:..|           .||||.            .||
Human   126 NIAFMYAKKEEWKK--AEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVGKLFRPNER 188

  Fly  2265 ------RRKYLQELQDMNSRRHTDNFTPSQKSPIALNRYDDFP---TDVTLKSLVGPKTVARALF 2320
                  ::.||.:...:.|....|:|  |..:|:.....:..|   |....::|.|  ...|.||
Human   189 QVAQLAKKDYLGKATVVASVVDQDSF--SGFAPLQPQAAEPPPRPKTPEIFRALEG--EAHRVLF 249

  Fly  2321 NFQGQTSKELSFRKGDTIYIRRQIDANWYEGEHNAMIGLLPASYVEIVS---------RDGARTP 2376
            .|..:|.:||....|:.:::.::.:.||.....|...||:|.:|:|.|.         ::.:...
Human   250 GFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVELRIHPQQQPQEESSPQ 314

  Fly  2377 SKRPSEGQARAKYNFQAQSG---------IELSLNKGELVTLTRRVDGNWFEGKIANRKGIFPCS 2432
            |..|:...::|....|...|         ::||:.    :..|.:|... :...:..:.|: |.|
Human   315 SDIPAPPSSKAPGRPQLSPGQKQKEEPKEVKLSVP----MPYTLKVHYK-YTVVMKTQPGL-PYS 373

  Fly  2433 YVEVLTDIGAEDIAARTTTVITSQSTTNLRPNLDVLRTNINNEFNTLTQNGAQPPNGILK----- 2492
            .|        .|:.::...:....:..:.||       ..:||...|:::..:...|.:|     
Human   374 QV--------RDMVSKKLELRLEHTKLSYRP-------RDSNELVPLSEDSMKDAWGQVKNYCLT 423

  Fly  2493 --------------ETRTLHKTDALHVDTSSEPLAYR-----ALYKYRPQNSDELELLEGDVVHV 2538
                          |.:...|.||.:..|  ||...:     ||:.|.....::||..|||::.|
Human   424 LWCENTVGDQGFPDEPKESEKADANNQTT--EPQLKKGSQVEALFSYEATQPEDLEFQEGDIILV 486

  Fly  2539 LEKCDDGWFVGTSQRTGCFGTFPGNYVE 2566
            |.|.::.|..|..:  |..|.||..:||
Human   487 LSKVNEEWLEGECK--GKVGIFPKVFVE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 MDN1 <43..328 CDD:227596
Sorb 1959..2003 CDD:413404
SH3_Sorbs_1 2315..2367 CDD:212715 15/51 (29%)
SH3_Sorbs_2 2384..2436 CDD:212716 11/60 (18%)
SH3_Sorbs_3 2514..2567 CDD:212714 19/58 (33%)
NCF2NP_000424.2 TPR repeat 6..32 CDD:276809
TPR_11 11..68 CDD:290150
TPR repeat 36..66 CDD:276809
TPR 1 37..70
TPR_11 41..98 CDD:290150
TPR 2 71..104
TPR_1 71..>98 CDD:278916
TPR repeat 71..98 CDD:276809
TPR 3 121..154 8/29 (28%)
SH3_p67phox_N 244..297 CDD:212804 16/52 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..346 5/42 (12%)
PB1_P67 351..429 CDD:99727 14/94 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..458 7/26 (27%)
SH3_p67phox_C 461..513 CDD:212979 19/54 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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