DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAP and Sh3rf2

DIOPT Version :9

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:NP_001139771.1 Gene:Sh3rf2 / 269016 MGIID:2444628 Length:735 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 MDN1 <43..328 CDD:227596
Sorb 1959..2003 CDD:413404
SH3_Sorbs_1 2315..2367 CDD:212715
SH3_Sorbs_2 2384..2436 CDD:212716
SH3_Sorbs_3 2514..2567 CDD:212714
Sh3rf2NP_001139771.1 RING-HC_SH3RF2 11..55 CDD:319663
RING-HC finger (C3HC4-type) 12..52 CDD:319663
SH3_SH3RF2_1 128..181 CDD:212862
SH3_SH3RF2_2 191..247 CDD:212865
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..302
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..378
Interaction with PAK4. /evidence=ECO:0000250|UniProtKB:Q8TEC5 372..465
SH3_SH3RF2_3 386..440 CDD:212718
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..534
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 612..720
Interaction with PPP1CA. /evidence=ECO:0000250 647..652
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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