DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and Sorbs2

DIOPT Version :10

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:XP_011240500.1 Gene:Sorbs2 / 234214 MGIID:1924574 Length:1501 Species:Mus musculus


Alignment Length:1837 Identity:407/1837 - (22%)
Similarity:616/1837 - (33%) Gaps:625/1837 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   994 QSDPKLLVC----LSPGQRDLVNNQTQPDDLL-DAHQKFVERRGYHELSKAQVLEQDHQQQQSEM 1053
            ||.|.||..    .||.......|...|:.|. ||....:..:|:                    
Mouse    26 QSSPNLLAAGRESQSPDSAWRSYNDRNPETLNGDATYSSLAAKGF-------------------- 70

  Fly  1054 LKTAAMMRELRKSLSPPAPPVPPPPVPVKSAETAAKATAHENAKRDDASEQKQKI--AACESSSL 1116
                   |.:|.:|.....|...||.|.:.....:::..:..:|.|..:.....|  .:|.....
Mouse    71 -------RSVRPNLQDKRSPTQAPPPPARKESFDSQSLINNQSKGDILNSLVTNIQTPSCTEDFT 128

  Fly  1117 ENKPRRAADLGAQQSAE--------QRQSSSTTTSSHKATTE----------------------- 1150
            ..||..    |...|:|        ..:||:|.:.:.|.|..                       
Mouse   129 NLKPLH----GTMHSSEDSKQTVVYSEESSTTVSYTQKITNPLPAASSSSPAQLGDINTPFLQED 189

  Fly  1151 -TMSSDTAKFPTLD-SMESELARMFPQHKGDIFEEQRKRFSNIEFP-----------SHQPVSQT 1202
             |..|.|.:..||. :...:|...||             |:..:||           |..|:...
Mouse   190 YTQDSQTRRISTLKLTPNQDLGSSFP-------------FNTPQFPQPTDVPSFLKRSCSPIPNP 241

  Fly  1203 KRYS---NIETSSYESKKRMENGQVVYDVSTSSHEKKEQGDPPKDQPVPPVPPPPIMSATKLNGN 1264
            ..::   :|:....||.|:..      :|...|.|...|.|............|  .|...:|||
Mouse   242 DTHTASLSIQIHDLESHKQFP------EVPPESAEMPLQQDRQTSSDATTCQSP--ASQITINGN 298

  Fly  1265 TFIDGDVAP-----KNSQPSRESGSGSGNGTYEEFRQRAKAAADAFGEQREQQNGLDQDRVFKDF 1324
            :  .|.|:|     :...||..|...|.|.:......|:..:|:.:.:..:..:|          
Mouse   299 S--GGAVSPVSYYQRPFSPSAYSLPASLNSSIIMQHGRSLDSAETYSQHAQSLDG---------- 351

  Fly  1325 DRLSQQMHAELQSTREKREK--SASMY------DLSGF--------TRPASGHPRLDELQQRRHA 1373
             .:...:.....|..|||..  .|..|      |.||.        .||...:..:  .:|....
Mouse   352 -TMGSSIPLYRSSEEEKRVTVIKAPHYPGIGPVDESGIPTAIRTTVDRPKDWYKTM--FKQIHMV 413

  Fly  1374 HMQELEREIERSAKSRQERMSSVPRQMEATP---PRTHEIPIELEPRSRRAESLCNLNEPPPRPH 1435
            |..:.:.::..:..:....:.:.|...::.|   .:|:. |:.........::...:..|.|.||
Mouse   414 HKPDEDTDMYNTPYTYNAGLYNSPYSAQSHPAAKTQTYR-PLSKSHSDNGTDAFKEVPSPVPPPH 477

  Fly  1436 ---------TTVGHYNHPVVQDDWSRYANDLGYSENIARPFAREVEICYQRQNQRTPHCIRAPRL 1491
                     :|:.|        ||.              |..|:|:   .|:.:..|..|     
Mouse   478 VPPRPRDQSSTLKH--------DWD--------------PPDRKVD---TRKFRSEPRSI----- 512

  Fly  1492 SASTNDLSSSSQYSYDTFNAYGGRRTHAPMLNQAQQQQRPHYGSCYSMIERDPNPRYISTTSRRG 1556
                        :.|:            |..:...|.:||           .|.|          
Mouse   513 ------------FEYE------------PGKSSILQHERP-----------PPLP---------- 532

  Fly  1557 VSPAPPPVATPQQQQVPP----PAYDRQQRRSSLPRELHEQQLKYILSKEEELKFEVERLQQERR 1617
              |.|.||  |::....|    |:.|..:..|..||.                            
Mouse   533 --PTPTPV--PREPSRKPLSVSPSTDGLRSPSPPPRS---------------------------- 565

  Fly  1618 RLMEEMQRAPVLPAPQRRESYRPAAKLPTLSEDEVFRQQMA------EEWMNKVAEREERRQHKI 1676
                      .:|||      ||:|  |.||.....|...|      |.|....:|.|.......
Mouse   566 ----------CVPAP------RPSA--PDLSPTRTGRINPADIDLENEPWYKFFSELEFGHPPPK 612

  Fly  1677 IRISKIEDEHDHSAVDKATISDEFLDRVKERRHKLSMPADS-----DWESGAESQPQ--PAAQSQ 1734
            ..:..::| |.....::.:|....:||..||      |:.|     |:....:|:|.  |.....
Mouse   613 KALDYVQD-HSSGVSNEVSIYQSSIDRSLER------PSSSASMAGDFRKRRKSEPAVGPLRGLG 670

  Fly  1735 PESDVEAPPVRILEGQAEANLRQLPRHLREFAK--FSTSEQLPDGAQMERHEEQERREEATDNAH 1797
            .:|.....|     |:|:     ||.....|.|  .|:|...|..||                 .
Mouse   671 DQSSSRTSP-----GRAD-----LPGSSSTFTKSFISSSPSSPSRAQ-----------------G 708

  Fly  1798 SSATKKTSIVKTYKVSRLPPS--------------VQGEFPGQFSGGNRGRLYRER----SQTAR 1844
            ...:|....:.:|......||              |.|:.....:..|..::.|:.    |.|..
Mouse   709 GDDSKMCPPLCSYSGLNGTPSGELECCNAYRQHLDVPGDSQRAITFKNGWQMARQNAEIWSSTEE 773

  Fly  1845 LVSHNIPLELTSNHSSSPDSDFNPGCGSSPAPGSSTQSSIPSLVQS------PTPAPPPPIEPL- 1902
            .||..|       .|.|.|...|..|.|.|.|.:.::|....|.:.      |.....|.|:.: 
Mouse   774 TVSPKI-------KSRSCDDLLNDDCDSFPDPKTKSESMGSLLCEEDSKESCPMTWASPYIQEVC 831

  Fly  1903 --------NPSSSTAGGILGTALLLGLSLLTAWNKFIYKVKH-----EYMSEPETGSDRPRKMAQ 1954
                    :.|:..|.|.|.                :||..|     :.|:.....|.:.|.:..
Mouse   832 GNSRSRLKHRSAHNAPGFLK----------------MYKKMHRINRKDLMNSEVICSVKSRILQY 880

  Fly  1955 LGRRQYDGI---------GPVTNDGMPIILRSEVKEPHQHEWYKRLYQTIHKQKN-GDDFVIRYK 2009
            ...:|:.|:         ..|..|.:|    :.:.|      :::|.|......| ||:.:....
Mouse   881 EKEQQHRGLLHGWSQSSTEEVPRDVVP----TRISE------FEKLIQKSKSMPNLGDEMLSPIT 935

  Fly  2010 --------CPRARPSYKSNGYVSEPEPNYDSDYSTVRYRTQNPHRVQSVSSAVNVR-NLNQDEKL 2065
                    ||:.|.|.:|   :.|.|       :.||:.:|.....:| ::.|.:. .:..||: 
Mouse   936 LEPPQNGLCPKRRFSIES---LLEEE-------TQVRHPSQGQRSCKS-NTLVPIHIEVTSDEQ- 988

  Fly  2066 YGTMPNPIKSAQNSYKNQPGRIENYT-----TGHSSVSEKEKKEWWDEVMDIFNGNLE------- 2118
                  |....:.|..:|.|.:.:::     .|.|..||.:...:.....:.|.|:..       
Mouse   989 ------PRTHMEFSDSDQDGVVSDHSDYVHVEGSSFCSESDFDHFSFTSSESFYGSSHHHHHHHH 1047

  Fly  2119 ---------QSKLSPLYT------------EGNLSRALAKE--SGYTSDSNLV----FRKKEVPV 2156
                     :.:....||            ..|:.|...:|  .|.:..:.||    ||:|::  
Mouse  1048 HHRHLISSCKGRCPASYTRFTTMLKHERAKHENMDRPRRQEMDPGLSKLAFLVSPVPFRRKKI-- 1110

  Fly  2157 SSPLSPVEQKQAYKS------------------------LQAGGEPP------LLGFRKP-APEK 2190
               |:|  |||..|:                        .:.|..|.      |:....| .||:
Mouse  1111 ---LTP--QKQTEKAKCKASVVEALDSALKDICDQIKAEKRRGSLPDNSILHRLISELLPQIPER 1170

  Fly  2191 PRDL-----DPNAPPIPPQPPVKGLS--------------SYDFPYSTDTVDGSDVNIHFKTPIR 2236
            ...|     .|...|..|.|| .|.|              |..|| ..||..    |.|      
Mouse  1171 NSSLHALKRSPMHQPFHPLPP-DGASHCPLYQNDCGRMPHSASFP-DVDTTS----NYH------ 1223

  Fly  2237 HEQRQNLSEEELAIRQAEHMQKLYHEERRRKYLQELQDM-NSRRHTDNFTPSQKSPIALNRYDDF 2300
                  ..:...|:...:|       |..|.|...|.|: .|.......||.::           
Mouse  1224 ------AQDYGSALSLQDH-------ESPRSYSSTLTDLGRSASRERRGTPEKE----------- 1264

  Fly  2301 PTDVTLKSLVGPKTVARALFNFQGQTSKELSFRKGDTIYIRRQIDANWYEGEHNAMIGLLPASYV 2365
                       .|..|:|:::|:.||||||||:||||:||.|:||.|||||||:..:|:.|.|||
Mouse  1265 -----------VKLPAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYV 1318

  Fly  2366 EIVSRDGARTPSK-----RPSE-GQARAKYNFQAQSGIELSLNKGELVTLTRRVDGNWFEGKI-- 2422
            |.::......|::     :|.| |:|.|||||.|.:.:||||.||:.:.|.:|||.||:||||  
Mouse  1319 EKLTPPEKAQPARPPPPVQPGEIGEAIAKYNFNADTNVELSLRKGDRIILLKRVDQNWYEGKIPG 1383

  Fly  2423 ANRKGIFPCSYVEVL--TDIGAEDIAARTTTVITSQSTTNLRPNLDVLRTNINNEFNTLTQNGAQ 2485
            .||:||||.|||||:  ...||||.                 |:..:..:..::...||:.|..|
Mouse  1384 TNRQGIFPVSYVEVVKRNAKGAEDY-----------------PDPPLPHSYSSDRIYTLSSNKPQ 1431

  Fly  2486 PPNGILKETRTLHKTDALHVDTSSEPLAYRALYKYRPQNSDELELLEGDVVHVLEKCDDGWFVGT 2550
            .| |...|          ::....||  ::|||.|.|:|.|||||.|.|||.|:|||||||||||
Mouse  1432 RP-GFSHE----------NIQGGGEP--FQALYNYTPRNEDELELRESDVVDVMEKCDDGWFVGT 1483

  Fly  2551 SQRTGCFGTFPGNYVER 2567
            |:||..|||||||||:|
Mouse  1484 SRRTKFFGTFPGNYVKR 1500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 Sorb 1959..2003 CDD:470634 10/53 (19%)
SH3_Sorbs_1 2315..2367 CDD:212715 32/51 (63%)
SH3_Sorbs_2 2384..2436 CDD:212716 32/53 (60%)
SH3_Sorbs_3 2514..2567 CDD:212714 39/52 (75%)
Sorbs2XP_011240500.1 Sorb 375..419 CDD:460492 8/45 (18%)
SH3_Sorbs2_1 1267..1321 CDD:212853 33/53 (62%)
SH3_Sorbs2_2 1342..1398 CDD:212856 34/55 (62%)
SH3_Sorbs2_3 1441..1501 CDD:212850 42/62 (68%)

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