DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and sorbs2

DIOPT Version :9

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:XP_031751950.1 Gene:sorbs2 / 100196922 XenbaseID:XB-GENE-478190 Length:1798 Species:Xenopus tropicalis


Alignment Length:2121 Identity:413/2121 - (19%)
Similarity:646/2121 - (30%) Gaps:896/2121 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   994 QSDPKLLVCLSPGQRDLVNNQTQPDDLLDAHQKFVERRGYHELSKAQVLEQDHQQQQSEMLK--- 1055
            ||.|.|   |:.||              |:|.                |:.|..:..::.||   
 Frog    26 QSSPNL---LASGQ--------------DSHP----------------LDSDVWRSYNDSLKDGL 57

  Fly  1056 ---------TAAMMRELRKSL----SPP------APPVPPPPVPVKSAETAAKATAHENA--KRD 1099
                     ||...|.:|.:|    ||.      |.|:|||          .|.:.:.:.  .:.
 Frog    58 NDDSGGSSLTAKGFRSVRPNLQEKKSPTQKSVKVAVPLPPP----------RKGSYYRSTTYPQG 112

  Fly  1100 DASEQKQKIAACES--SSLENKPRRAADLGAQQSAEQRQSSSTTTSSHKATTETMSSDTAKFPTL 1162
            |.:|........:|  .||.|  |.:....|:||....| :.|||:.|           ..|..|
 Frog   113 DDNENSAPTMLTQSGVQSLTN--RESFLYSAKQSKNMMQ-THTTTNPH-----------ISFSKL 163

  Fly  1163 DSMESELARMFPQHKGDIFEEQRKRFSNIEFPSHQPVSQTKRYSNIETSSYESKKRMENGQVVYD 1227
            :....:...|...|..                     ||..::..:.|.....|:...|     .
 Frog   164 NMKAEDTNSMLIHHDS---------------------SQDSKHRRVSTLKLILKESPTN-----K 202

  Fly  1228 VSTSSHEKKEQGDPPKDQPVPPVPPPPIMSATKLNGNTFIDGDVAPKNSQPSRESGSGSGNGTY- 1291
            ..::.|..|:..      |:.|.|||.|:...:..         :|:....|......|...|. 
 Frog   203 TQSNMHFIKDSA------PLVPAPPPTIIPEARRQ---------SPEKHTASLSVSIASNLATKA 252

  Fly  1292 ----EEFRQRAKAAADAFGEQREQQNGLDQDRVFKDFDRLSQQMH-AELQSTREKREKSASMYDL 1351
                |..|.....:.|.|.......:|                 | |...|.....|...:...:
 Frog   253 EDKPESHRCSTVHSTDTFKVPAACYSG-----------------HAASFPSATWSAESQVTPVTV 300

  Fly  1352 SGFTRPASGHPRLDELQQRRHAHMQELEREIERS---AKSRQERMSSVPR---QMEATPPRTHEI 1410
            :|    :||.|.         :.|...:|....|   ..||....|.|.:   .||:|...:.:.
 Frog   301 NG----SSGSPA---------SPMSHYQRTFSPSPTYPSSRSLNSSMVMQHGAMMESTESYSQQF 352

  Fly  1411 PIELEPRSRRAESLCNLNEPPPRPHTTVGHYNHPVVQDDWSRYANDLGYSENIARPFAREVEICY 1475
            |.::. ||.....:|.::|...:. |.:...::|           .:|..:....|.|....:..
 Frog   353 PSDVS-RSSSTIPICRISEEEKKV-TVIKAPHYP-----------GIGPVDESGIPTAIRTTVDR 404

  Fly  1476 QRQNQRTP----HCIRAPRLSASTNDLS-SSSQYSYDTFN--------AYGGRRTHA--PMLNQA 1525
            .:...:|.    |.:..|     .||:. .|:.|:|::.|        ::...:||.  |:....
 Frog   405 PKDWYKTMFKQIHMVHKP-----DNDMDYPSAAYAYNSDNYSATLPTFSHPAAKTHTYRPLTKSV 464

  Fly  1526 QQQQRPHYGSCYSMIERDPNPRYISTTSRRGVSPAPPPVATPQQQQVPPPAYD-RQQRRSSLPRE 1589
            ...                     .|...|..||.|||..     .|||||.. |.:.:|||.:.
 Frog   465 SDN---------------------GTDVFRESSPLPPPPV-----PVPPPAVPLRPREQSSLDKN 503

  Fly  1590 LHEQQLKYILSKEEELKFEVERLQQERRRLME-EMQRAPVLPAPQRRESYRPAAKLPTLSEDEVF 1653
            ..|         ..:.|.:..|.:.|.|.:.| |..::.:|      |..||..:   :..||:.
 Frog   504 EWE---------PPDRKVDTRRFRSEPRSIFEYEPGKSSIL------EHERPNGR---IYPDEID 550

  Fly  1654 RQQMAEEWMNKVAEREERRQHKIIRISKIEDEHDHSAVDKATISDEFLDRVKERRHKLSMPADSD 1718
            .:.  |.|....:|.|..|.                                        |....
 Frog   551 LEN--EPWYKFFSELEFGRP----------------------------------------PPKKI 573

  Fly  1719 WESGAESQPQPAAQS---QP--ESDVEAPPVRILEGQAEANLRQLPRHLREFAKFSTSEQLPDGA 1778
            .:...||.|:...::   ||  |..:|.|       .:.|:         ::.|...||  |..:
 Frog   574 LDCFQESPPRVPTETSLYQPSIEKGIERP-------SSSAS---------DYRKRRKSE--PSVS 620

  Fly  1779 QMERHEEQERREEATDNAHSS---ATKKTSIVKTYKVSRLPPSVQGEFPGQFSGGNRGRLYRERS 1840
            ....|.:|    .|:.|..|.   .:|.|:..|.| ::..|.|     |.:..||:..|:|    
 Frog   621 HQRSHSDQ----NASRNTLSRIDIQSKNTTPRKPY-INSSPSS-----PSRAKGGDVSRMY---- 671

  Fly  1841 QTARLVSHNIPLELTSN---------------HSSSPDSDFNPG---CGSSPAPGSSTQSSIPSL 1887
              ..|.::::|.:..||               |.::...:|..|   ...:....|||:.:....
 Frog   672 --PPLFTYSVPKQNGSNGLDYCGSYSHHLVVPHDTARSINFKNGWQMTRQNAEVWSSTEETASPK 734

  Fly  1888 VQSPTPAPPPPIEPLN-PSSSTAGGILGTALLLGLS---LLTAWNKFIYK----------VKHEY 1938
            ::|.:.......:..| .::.|....:|:.|....|   :..||.. .||          |:|  
 Frog   735 IKSRSCDDLLAEDHSNFCNTQTKSESMGSLLCDEKSPQNIPLAWGN-SYKSEGCASNQSRVRH-- 796

  Fly  1939 MSEPETGSDRP------RKMAQLGRRQYDGIGPVTNDGMPIILRSE----VKE---PHQHEWYKR 1990
                .:..|.|      :||.::.|:.              :|.||    ||.   .::.|..|.
 Frog   797 ----RSAHDTPGFLKLYKKMHRINRKD--------------LLSSEVICSVKSRILQYEQEQQKG 843

  Fly  1991 LY-----------------------QTIHKQKN----GD--------DFVIRYKCPRARPSYKSN 2020
            ||                       |.|.|.|:    ||        |......||:.|.|.:| 
 Frog   844 LYAGWRADSEEVPRDMVPTRISEFEQLIQKSKSMPNLGDEMFSAVSLDISTNSSCPKRRFSIES- 907

  Fly  2021 GYVSEPEPNYDSDYSTVRY--RTQN--PHRVQSVSSAVNVRNL----NQDEKLYGTMPNPIKSAQ 2077
               ...|.:.:...|.|::  :|::  |..::..|..:...|:    :..:.:...:.:.|:...
 Frog   908 ---LLDEESQERHVSQVQHNGKTKSLVPVHIEVTSDQIPRSNMDFSDSDQDAVVSDLSDFIQIEG 969

  Fly  2078 NSYKNQPGRIENYT---------TGHSSVSEKEKKEWWDEVMDIFNGNLEQSKLSPLYTEGN--L 2131
            :|:.:: ...::|:         :||..............::....|....|     ||...  |
 Frog   970 SSFCSE-SDFDHYSFTSSESFYGSGHHHHHHHHHHHHHRHLISSCKGRCPAS-----YTRFTTML 1028

  Fly  2132 SRALAKESGYTSD---------SNLVFRKKEVPVSSPLSPVEQKQAYKSLQAGGEPPLLGFRKPA 2187
            ....||:....|.         |.:.|....||.....|...:|||                   
 Frog  1029 KHERAKQEKIESPGKHELDSGLSKIAFLVSPVPFRRKKSATPKKQA------------------- 1074

  Fly  2188 PEKPR---------------------------DLDPNA------PPIPPQPPVKGLSSYDFPYST 2219
             ||||                           .|..|:      ..:.|..|.:..|...||.||
 Frog  1075 -EKPRSKASVFEALDSALQDICDQIKAEKRRGSLPDNSILHRLISELLPDVPERNSSLKAFPLST 1138

  Fly  2220 D-TVDGSDVNIHFKTPIRHEQRQNLSE---EELAIRQAEHMQKLYHEERRRKYLQELQDMNSRRH 2280
            . ..||:   ||:  |:    .||..|   :.:|                   .|::...|:...
 Frog  1139 PLPQDGA---IHY--PV----FQNDCESPPDGVA-------------------YQDMDATNNNAQ 1175

  Fly  2281 TDNFTPSQKSPIALNRYDDFPTDVTLKSL----VGPKTVARALFNFQGQTSKELSFRKGDTIYIR 2341
            .::|. .|..|.:...|....|:|| :|:    ...:..|||:::|:.||.|||||.||||:||.
 Frog  1176 ENSFC-FQADPESPRSYSSAFTNVT-RSVARRGAQEREPARAVYDFKAQTPKELSFSKGDTVYIL 1238

  Fly  2342 RQIDANWYEGEHNAMIGLLPASYVEIVSRDGARTPSKRPSEGQAR------AKYNFQAQSGIELS 2400
            |:||.|||||||:..||:.|.||||.::......|::.|...|||      |||||.|.:.:|||
 Frog  1239 RKIDKNWYEGEHHGRIGIFPVSYVEKMTLTEKLQPARPPPPAQAREIGEAVAKYNFTADTNVELS 1303

  Fly  2401 LNKGELVTLTRRVDGNWFEGKI--ANRKGIFPCSYVEVL-------------------------- 2437
            |.||:.|.|.::||.||:||||  ..|:||||.:|||:|                          
 Frog  1304 LKKGDRVLLLKQVDQNWYEGKIVGTKRQGIFPVAYVEILKKGPSKSAGDSSHCPGPQSTSIDRMH 1368

  Fly  2438 ---------------------------TDIGAEDIAARTT-----TVITSQSTT----------- 2459
                                       ||.....:.|.|:     ||..|.|||           
 Frog  1369 NSSPATSAATKRLRTPPLTLRPDSASCTDTSKGKLDAVTSEWLNLTVGFSPSTTPAPTLPPFPDQ 1433

  Fly  2460 ------------------------NLRPNLD--------------------------------VL 2468
                                    |..|.::                                ::
 Frog  1434 FLSSAEKPSSLPLTVIQPEPFSSSNFTPRIEEGHFVPITSPKTISSCHLPVPPLFPDTVISSPII 1498

  Fly  2469 R------------------------------------TNINNEFNTLTQ-------------NGA 2484
            :                                    |.|:::.:.:::             |..
 Frog  1499 QQIETSVMPLTNSDKCIQEETFLAQSDIQGLCCGKHATAISSDLSNVSEPVAADPIHTESATNAL 1563

  Fly  2485 QPPN---------------------GILK------------------------------------ 2492
            .|.|                     |.:|                                    
 Frog  1564 SPKNLQLVDDQEEEICEELLSIIEGGQMKSQDSGFYRCEPHAEQLPALYIEEDGTSENLKAPVKS 1628

  Fly  2493 -------------------------------------------------------------ETRT 2496
                                                                         .::.
 Frog  1629 ITHPIAGHEECPSSSNTELSSSHPFHAVSTPPSESVCSHPTVSPFSSSLTKFTSRQESQSPRSKA 1693

  Fly  2497 LHKTDAL-----------------------------------HVDTSSEPLAYRALYKYRPQNSD 2526
            :.|:|.:                                   ::.|..||  |::||.|.|:|.|
 Frog  1694 IFKSDLVVVGKPPRSPVMSRKTCNSPVKSPSITHRRPVFTHENIQTLGEP--YQSLYNYMPRNED 1756

  Fly  2527 ELELLEGDVVHVLEKCDDGWFVGTSQRTGCFGTFPGNYVER 2567
            ||||.||||:.|:||||||||||||:||..|||||||||:|
 Frog  1757 ELELREGDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKR 1797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 MDN1 <43..328 CDD:227596
Sorb 1959..2003 CDD:413404 15/85 (18%)
SH3_Sorbs_1 2315..2367 CDD:212715 33/51 (65%)
SH3_Sorbs_2 2384..2436 CDD:212716 32/59 (54%)
SH3_Sorbs_3 2514..2567 CDD:212714 39/52 (75%)
sorbs2XP_031751950.1 Sorb 381..425 CDD:396678 7/59 (12%)
SH3_Sorbs2_1 1211..1265 CDD:212853 34/53 (64%)
SH3 1286..1342 CDD:418401 30/55 (55%)
SH3_Sorbs2_3 1738..1798 CDD:212850 43/62 (69%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I7587
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 273 1.000 Inparanoid score I2916
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8484
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.080

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