DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAP and dnmbp

DIOPT Version :9

Sequence 1:NP_001369075.1 Gene:CAP / 36084 FlyBaseID:FBgn0033504 Length:2568 Species:Drosophila melanogaster
Sequence 2:XP_001921555.3 Gene:dnmbp / 100005174 ZFINID:ZDB-GENE-101026-2 Length:1673 Species:Danio rerio


Alignment Length:2212 Identity:380/2212 - (17%)
Similarity:668/2212 - (30%) Gaps:833/2212 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 EEVSSTTGSLAGTLSPPPRYLVESPKNVSSGQF-SNFSRNVQIQEMELN-------SDFSSGEFN 480
            ||:...||.:...||....:.:...|:..:||| :.|..:|.|...:..       :||:|.|..
Zfish    19 EELPLFTGDVIEVLSVVDEFWLLGNKDGVTGQFPTTFVESVTIPGTKAGENLYVCINDFNSAEAG 83

  Fly   481 SLQSPL----VCEVDSESEGSVVLGPERSPSDQQVPSSSRVEQHEQVRQKRAQYRNA------LE 535
            :|  ||    |...:|..:...:.|.....|....|.|...|.....|.::...|:|      |.
Zfish    84 NL--PLKRGDVVAAESSMDSVWMRGHNAWGSRGLFPVSCIKELELSGRSRQLSERSAAVQASELP 146

  Fly   536 SHFMPQ---LLN-PRYLDSILEENE-------------W-------RNSTASSGGSDQTG-IRTP 575
            .|.:.|   |:| ...||..|:..|             |       |......|..:..| :|:|
Zfish   147 PHALGQARALMNLHAQLDEELDFREGDVITIIGLPEPGWFQGELDNRTGLFPEGFVELLGPLRSP 211

  Fly   576 KLNETFPRS---QLDFSRRHKRREEAPSPLKLETKLLEESTDLESCTRLQSALSPQSEDAELVYL 637
             |.|..|::   ..|:|...:.|       :.|.:..||..::|    :|.....:.|:...:| 
Zfish   212 -LEEPEPQTLEQYPDYSNEDEER-------RAEEEKDEEPPEME----IQQCQEDEEEEEGAIY- 263

  Fly   638 SSSASSSVSDLMELELEQAAALAE-RAL----VDLDT-DASRLIARPDD-----EMSSTSTTTAD 691
                              ..||.| |||    :|.|. |..|::|..||     ::.|.......
Zfish   264 ------------------GIALYEFRALEPGELDFDVGDRIRILASMDDGWLEGQIHSRRGVFPH 310

  Fly   692 R---SETEAETETETEREGEQSRESTPVNANPTLASSQSSLLSAATPTPTPTPTPADREQLAKDT 753
            |   .|.:.:|..:||         |.:|        :.|:........||..|.|:.:....: 
Zfish   311 RFVKIEGQLQTVPQTE---------TLIN--------EISVPKREEECYTPDYTSAEEDHTVPE- 357

  Fly   754 NVSGGSTVSFGAASPLAATREEFVRNMDKVRELIEMTRREQEQGELPRSPSPPPVPPPPASVPPY 818
                     :|        :|..::....|.:|....|||:||.|             ......:
Zfish   358 ---------YG--------QELSIQQDHTVWDLDYFERREEEQKE-------------NNGHNVH 392

  Fly   819 SPESSSFHLASLQLKRQESNDSHCSDSTTHSQCTAINLASPPPPPTAQPPTPPLRQKPAPPPVPQ 883
            |.:||       |.:|...|.|...                          |..|::..|||   
Zfish   393 SDQSS-------QERRMTQNQSQVQ--------------------------PQERRRDRPPP--- 421

  Fly   884 PVSPPAPPTPQSEPELSVADSVANANADVDADADTDTEAIKKLRLLCTEQLASMPYGEQVLEELA 948
                     ||::|                                                   
Zfish   422 ---------PQTQP--------------------------------------------------- 426

  Fly   949 SVAQNISDQSQNKMPYPMPQLPHIKELQLNANESKSSSAWLGLPTQSDPKLLVCLSPGQRDLVNN 1013
                |....|.:            :.:|:|    :.||..:|.|                     
Zfish   427 ----NRGSSSAH------------RSVQIN----RRSSPNMGRP--------------------- 450

  Fly  1014 QTQPDDLLDAHQKFVERRGYHELSKAQVLEQDHQQQQSEMLKTAAMMRELRKSLSPPAPPVPPPP 1078
            |..|            |...|.||..:.....|           |.:|:             |||
Zfish   451 QLPP------------RPSLHALSNRKYSTGSH-----------ASLRQ-------------PPP 479

  Fly  1079 VPV---KSAETAAKATAHENAKRDD---ASEQKQKIAACESSSLENKPRRA--------ADLGAQ 1129
            .|:   :|.....|.:.:....|::   ||...:...:.:||..:|:.::.        ||:.:.
Zfish   480 APITMNQSLNPPNKTSPNSTWTRNNGKYASYNSRNPLSSKSSGEKNRQKKLTRHASVNDADIISG 544

  Fly  1130 QSAEQRQSSSTTTSSHKATTETMSSDTAKFPTLDSMES----ELARMFPQHKGDIFEEQR----- 1185
            .|:||:.......|:...|::||.:.......|::..|    |..:..|.|..:..|:.|     
Zfish   545 GSSEQQAWPQVQGSNGFPTSQTMGTLALSAKDLEAKLSQQLIEFEKSLPSHSNEATEQSRWEEVS 609

  Fly  1186 --------KRFSNIEFPSHQPVSQTKRYSNIE-----TSSYESKKRMENGQVVYDVSTSSHEKKE 1237
                    :.||.:::.....:.:...:|:||     |||....            ::||.|:::
Zfish   610 GRLGNKVSRHFSIMDYSDENDIIRGSSHSSIERLLPSTSSPSGS------------ASSSLERRK 662

  Fly  1238 QGDPPKDQP---VPPVPPPPIMSAT--KLNGNTFIDGDVAPKNSQPSRESGSGSGNGTYEEFRQR 1297
            ...||..:|   .||.|.....|.|  ::....:.....||:...|...:.:.:...|...|   
Zfish   663 NLRPPPPRPRVLRPPAPTNTHWSQTNGRITPQPYRPARPAPRPPPPCPHTNAVTPPTTSNPF--- 724

  Fly  1298 AKAAADAFGEQREQQNGLDQDRVFKDFDRLSQQMHAELQSTREKREKSASMYDLSGFTRPASGHP 1362
                          .|..|::.:.::.:.....:.||.:..||:.                    
Zfish   725 --------------YNSPDEEEIVEEMEEPEDVLEAEKEMEREQE-------------------- 755

  Fly  1363 RLDELQQRRHAHMQELEREIERSAKSRQERMSSVPRQMEATPPRTHEIPIELEPRSRRAESLCNL 1427
                 |.|....::|:||||:..:.:.||..:.:..:.:.|               .|.::|.||
Zfish   756 -----QYRLLLRLEEVEREIDMYSNTAQELQAMLDEEQDET---------------SRQQALENL 800

  Fly  1428 NEPPPRPHTTVGHYNHPVVQDDWSRYANDLGYSENIARPFAREVEICYQRQNQRTPHCIRAPRLS 1492
                                                        |.|                  
Zfish   801 --------------------------------------------EFC------------------ 803

  Fly  1493 ASTNDLSSSSQYSYDTFNAYGGRRTHAPMLNQAQQQQRPHYGSCYSMIERDPNPRYISTTSRRGV 1557
                      .|:.:|..           |.|.|.|:       .:::...|          :.:
Zfish   804 ----------SYTMETLT-----------LEQQQLQE-------MTLLASQP----------KSL 830

  Fly  1558 SPAPPPVATPQQQQVPPPAYDRQQRRSSLPRELHEQQLKYILSKEEELKFEVERLQQER------ 1616
            ..:|...|..:.     |.....::|:.:..||.:.:..||...:..:|..::.||:::      
Zfish   831 ESSPASAANSED-----PELRMLEKRTKVIEELLQTEHDYIKDLQMCVKEIIQPLQKKQVQGIDF 890

  Fly  1617 --------------RRLMEEMQRAPVLP------APQRRESYR--------PAAKLPTLSEDEVF 1653
                          |||.:.:|....:.      ..|..:.|:        ..:.|.|..:||..
Zfish   891 DGLFGNISSVIDLSRRLNKTLQDTDSIGQVFLSYKDQLEDVYKIYCQNHDDAISLLETYEKDENI 955

  Fly  1654 RQQMAE----------EW-----------MNKVAEREERRQHKIIRI--SKIEDEHDHSAVDKAT 1695
            ::.:.|          ||           :.|..:|..|....::.:  :..|..||...:.:|.
Zfish   956 QKHVLECLEKLRGIYREWGKTNYINLGSFLIKPVQRVMRYPLLLMELLNTTPESHHDRQQLSEAV 1020

  Fly  1696 IS------------------------DEFLDRVKERRHKLSMPADSDWESGAESQPQPAAQSQPE 1736
            :|                        ||  ||:.::..||||.:.....:...|..:......|:
Zfish  1021 MSIKEINVNINEYKRRKDLVVKYRKGDE--DRLIDKISKLSMHSIIKKSNRVSSHLKHLTGISPQ 1083

  Fly  1737 SDVEA-----PPVRILEGQAEANLRQLP---RHLRE-----------FAKFSTSEQLPDGAQMER 1782
            ...||     ...|:.|...::.:|.:.   :|:||           |....|..|    .||:.
Zfish  1084 IKDEAFDDAEKRFRLQERLIKSFIRNISLYLQHIRESASVKVLAAISFCDIYTERQ----QQMDP 1144

  Fly  1783 HEEQERREEATDNAHSSATKKTSIVKTYKVSRLPPSVQGEFPGQFSGGNRGRL------------ 1835
            ...|......:|...:...::|..:....:::|.....|  |.:.....|.:|            
Zfish  1145 ERFQRAHRCISDKQFTEFKERTEALVITPLTQLLNMFTG--PHKLIQKRRDKLLDYDNCKERAER 1207

  Fly  1836 -----YRERSQTAR----LVSHNIPLELTSNHSSSPDSDFNPGCGSSPAPGSSTQSSIPSLVQSP 1891
                 .:|..||||    .::..:..||...|.::.|               ...|.:...||:.
Zfish  1208 LKDKRVQEELQTARNNYEALNAQLLDELPKFHRAAED---------------LFTSCVRGFVQAQ 1257

  Fly  1892 TPAPPPPIEPLNP--SSSTAGGILGTALLL-------GLSLLTAWNKFIYKVKHEYMSEPETGSD 1947
            .......:..|.|  ..|..||..|..:.|       .|.||.:::.|           ||    
Zfish  1258 RDFISLTLGELTPLLQLSGLGGTEGNLVSLFQEEHTRVLDLLQSFSFF-----------PE---- 1307

  Fly  1948 RPRKMAQLGRRQYDGIGPVTNDGMPIILRSEVKEPHQHEWYKRLYQTIHKQKNGDDFVIRYKCPR 2012
                                  .:|..:|...::           :|:.||..        |.|:
Zfish  1308 ----------------------NLPTTVRKTFEK-----------KTLEKQYT--------KKPQ 1331

  Fly  2013 ARPSYKSNGYVSEPEPNYDSDYSTVRYRTQNPHRVQSVSSAVNVRNLN--QD---EKLYGTMPNP 2072
            |.|:     ||.:.:.:...  ..|||..:|.::.:        ||.|  ||   ..|.|.:...
Zfish  1332 APPN-----YVLQTDEHRAG--LLVRYGPENLYQAE--------RNFNAAQDLDVSVLEGDIVGV 1381

  Fly  2073 IKSAQNSYKNQPGRIENYTTGHSSVSEKEKKEWWDEVMDIFNGNLEQSKLSPLYTEGNLSRALAK 2137
            ||............|:|..|         |...:...:..:|....||.:|       :....:.
Zfish  1382 IKQQDPMGSQNRWLIDNGVT---------KGFVYSSFLKPYNPRRSQSDVS-------IESQSSN 1430

  Fly  2138 ESGY----------TSDSNLVFRKKEVPVSSPLSPVEQKQAYKSLQAGGEPPLLGFRKPAPEKPR 2192
            ||||          .|:|.|.|.::...||...:..:.:   .:.:...|......|:.:..:..
Zfish  1431 ESGYGGSSPMFSRQNSNSTLTFNQETSTVSFTTATTQNQ---SNTRPNNESTPRKIRETSSNQRD 1492

  Fly  2193 DLDPNAPPIP-----PQPPVKGLSSYDFP---YST---DTVDGSDVNIHFKTPIRHEQRQNLSE- 2245
            .|:|.....|     .:..::....|..|   .||   |:|| ||.|    ||.....|.:||| 
Zfish  1493 SLEPGFRNSPNHKEVSETAIRNSREYSEPSHRSSTNHRDSVD-SDQN----TPTNSRDRLDLSET 1552

  Fly  2246 EELAIRQAEHMQKLYHEERRRKYLQELQDMNSRRHTDNFTPSQKSPIALNRYDDFPTDVTLKSLV 2310
            :..:.|.:.:.....:::.:..|      .:.:|...:::..|:.|           ..|.:..:
Zfish  1553 DSSSSRNSRYEPSSRYQDSKASY------GSHQRQNGDYSGQQRRP-----------QYTPEEYI 1600

  Fly  2311 GPK--------TVARALFNFQGQTSKELSFRKGDTIYIRRQIDAN----WYEGEHNAMIGLLPAS 2363
            .|:        .:..||::|..:.:.|||......:.|....|.|    |:.||.....|.:|::
Zfish  1601 EPEPEPEIDGHQIYYALYSFSARCANELSISANQRVRILEFQDMNGNQEWWLGEAGGRRGYVPSN 1665

  Fly  2364 YV 2365
            |:
Zfish  1666 YI 1667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPNP_001369075.1 MDN1 <43..328 CDD:227596
Sorb 1959..2003 CDD:413404 5/43 (12%)
SH3_Sorbs_1 2315..2367 CDD:212715 15/55 (27%)
SH3_Sorbs_2 2384..2436 CDD:212716
SH3_Sorbs_3 2514..2567 CDD:212714
dnmbpXP_001921555.3 SH3_DNMBP_N1 6..56 CDD:212728 10/36 (28%)
SH3 70..123 CDD:354299 13/54 (24%)
SH3_DNMBP_N3 152..202 CDD:212730 10/49 (20%)
SH3 263..312 CDD:354299 15/67 (22%)
RhoGEF 854..1031 CDD:306973 28/176 (16%)
BAR_DNMBP 1083..1275 CDD:153273 35/212 (17%)
SH3_DNMBP_C1 1356..1412 CDD:212732 13/72 (18%)
SH3_DNMBP_C2 1613..1669 CDD:213017 15/55 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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