DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12910 and C13A2.1

DIOPT Version :10

Sequence 1:NP_610569.1 Gene:CG12910 / 36082 FlyBaseID:FBgn0033502 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_504854.4 Gene:C13A2.1 / 182549 WormBaseID:WBGene00015718 Length:498 Species:Caenorhabditis elegans


Alignment Length:316 Identity:58/316 - (18%)
Similarity:105/316 - (33%) Gaps:103/316 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LRHEIYSAYFDARTDIVGNVRMDDEQMTIGSLRIFAILPERLRDSSINC--IVRFS--DFSSQEI 134
            |:..|||||:...:..:|:             ...|:|      .|||.  ...||  ||....|
 Worm    40 LKAFIYSAYYYPTSKSLGD-------------NALALL------MSINLPPTPHFSTPDFKEIII 85

  Fly   135 KAEEAGAM-------HDVHNNTFAAWSIMCPLHASRRSPLRLPQAVALAYASN----RLSHLSPT 188
            .||.:.:.       |.|:.|..      |.:.....:...:|....:...|:    .:....|:
 Worm    86 SAENSTSSIVVRTPHHKVNYNDH------CLIMTIFATAQLIPNVEKIKMVSDDGMTEIPFTKPS 144

  Fly   189 FIQISYPRNMTNMFGRSRPTISVCVGPL--HENYSNVLRLVE-------FVEMYRLQGATHFYFY 244
            ::              :|..: |||.||  .|.:.|.|..|.       ||.:|.:.....||  
 Worm   145 YV--------------NRDVV-VCVAPLFVSEQWQNFLFAVHIYKKYGAFVNLYLISAVNTFY-- 192

  Fly   245 YVEASEEVLRVLEHYQRIGLADVFEWNVQAHMQDVHYAGI---VAQFN-------------DCVY 293
                     .:::.|:..|...:..|..      |.::||   :|..|             ||:.
 Worm   193 ---------NLMKEYEEAGYLSIKPWVY------VKFSGIPKAIADTNSQIELRSQAAAQSDCLL 242

  Fly   294 RANVVDNFRYAAVVDLDEVVMPLKHNTLADYLRQCDEGRTAGFVFRNVFFHRRDSN 349
            :..  :..::....:|::|::|....|.....:|........:    :::.|.:.|
 Worm   243 QYK--EAAKFIMFFELEDVIIPRLAPTYVKEFQQLFNSDQLSY----IYYQRENYN 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12910NP_610569.1 Glyco_transf_92 209..423 CDD:426386 31/166 (19%)
C13A2.1NP_504854.4 Glyco_transf_92 148..403 CDD:426386 32/169 (19%)

Return to query results.
Submit another query.