DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12911 and CHD1

DIOPT Version :10

Sequence 1:NP_001286280.1 Gene:CG12911 / 36081 FlyBaseID:FBgn0033501 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001351042.1 Gene:CHD1 / 1105 HGNCID:1915 Length:1798 Species:Homo sapiens


Alignment Length:163 Identity:42/163 - (25%)
Similarity:60/163 - (36%) Gaps:27/163 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DSVLRGKSRQSRCVRCYEDRDRDRYYSGYSSRTGDDMRGSAWYYSGYDDRSRDRDYDRYYDRSRY 109
            |...|......|.:..|.|..:|| :.|.|.:..|..:..   ||.:.:....||:|.|...|||
Human  1625 DDSSRDSYSSDRHLTQYHDHHKDR-HQGDSYKKSDSRKRP---YSSFSNGKDHRDWDHYKQDSRY 1685

  Fly   110 YEDRYTPRTYDRYEGRGYDDYRRGSAYGGSYDRERGYGYDNRDRYYSGDRYSEGLSRDRYYDRSR 174
            |.||...|..|.:..|.:.....||.               :||.:|..|   ..|..|.:...|
Human  1686 YSDREKHRKLDDHRSRDHRSNLEGSL---------------KDRSHSDHR---SHSDHRLHSDHR 1732

  Fly   175 TSGYDRYDPYDRYYSRYDFRNYRPWDETYRGQS 207
            :|     ..|..:.|..|:|.:..|...:|..|
Human  1733 SS-----SEYTHHKSSRDYRYHSDWQMDHRASS 1760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12911NP_001286280.1 None
CHD1NP_001351042.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..252
CD1_tandem_CHD1-2_like 276..354 CDD:349313
CD2_tandem_CHD1-2_like 387..443 CDD:349308
DEAD-like_helicase_N 460..697 CDD:475120
PLN03142 464..>1000 CDD:215601
DEAH box 614..617
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1080..1120
CDH1_2_SANT_HL1 1124..1210 CDD:477096
DUF4208 1496..1586 CDD:464035
U2AF_lg 1640..>1734 CDD:273727 31/115 (27%)
U2AF_lg 1688..>1797 CDD:273727 22/96 (23%)
HisXaaSer_A3 <1719..1750 CDD:439608 9/38 (24%)
Blue background indicates that the domain is not in the aligned region.

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