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Protein Alignment Syb and Vamp8
DIOPT Version :9
Sequence 1: | NP_001137633.1 |
Gene: | Syb / 36080 |
FlyBaseID: | FBgn0003660 |
Length: | 152 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038964377.1 |
Gene: | Vamp8 / 83730 |
RGDID: | 620421 |
Length: | 116 |
Species: | Rattus norvegicus |
Alignment Length: | 89 |
Identity: | 29/89 - (32%) |
Similarity: | 57/89 - (64%) |
Gaps: | 0/89 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 NNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQ 104
:.:|...:::..|::|:.|..||..|||::|.|.:.|..|..:.:.||..:..|:..:.|:.||.
Rat 20 SGSAGNDRVRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKF 84
Fly 105 WWANMKMMIILGVIAVVLLIIVLV 128
||.|:||::|:.||.:::||::::
Rat 85 WWKNVKMIVIICVIVLIILILIIL 108
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5143 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000385 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45701 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.910 |
|
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