DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and VAMP714

DIOPT Version :9

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_197628.1 Gene:VAMP714 / 832297 AraportID:AT5G22360 Length:221 Species:Arabidopsis thaliana


Alignment Length:105 Identity:27/105 - (25%)
Similarity:60/105 - (57%) Gaps:2/105 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NDNYNQFGDHQIR--NNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQG 89
            ||.:::....|:.  ::|.:...|.:.:.:|.|:..:|..|:||::||..::..|.::...::..
plant   105 NDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDS 169

  Fly    90 ASQFEQQAGKLKRKQWWANMKMMIILGVIAVVLLIIVLVS 129
            :..|.:|:.:|:|..|..|.|::::|..:.|.||.|::.|
plant   170 SFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIAS 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 23/86 (27%)
VAMP714NP_197628.1 Longin 4..119 CDD:341428 3/13 (23%)
Synaptobrevin 124..212 CDD:395764 23/86 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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