DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and VAMP711

DIOPT Version :10

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_194942.1 Gene:VAMP711 / 829347 AraportID:AT4G32150 Length:219 Species:Arabidopsis thaliana


Alignment Length:106 Identity:26/106 - (24%)
Similarity:63/106 - (59%) Gaps:5/106 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NDNYNQFGDHQI--RNNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQG 89
            |:.:::....||  .:|:....::.:.:.::::|.|:|..|::|||:|.::|..|.::...::..
plant   104 NEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGN 168

  Fly    90 ASQFEQQAGKLKRKQWWANMKMMIILGVIAVVLLIIVLVSV 130
            ..:|.:||.:.:...||.|.|:.::|   .::||:|:.::|
plant   169 TFRFRKQARRFRSNVWWRNCKLTVLL---ILLLLVIIYIAV 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 21/85 (25%)
VAMP711NP_194942.1 Longin 4..118 CDD:341428 3/13 (23%)
Synaptobrevin 123..211 CDD:395764 22/87 (25%)

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