DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and VAMP724

DIOPT Version :9

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_193313.6 Gene:VAMP724 / 827258 AraportID:AT4G15780 Length:184 Species:Arabidopsis thaliana


Alignment Length:90 Identity:24/90 - (26%)
Similarity:47/90 - (52%) Gaps:16/90 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SNNNDF-PILPPPPNANDNYNQFGDH--QIRNNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERD 73
            |.|.:| |::      .::.|...||  :|       :||.:.:|:|.||..||..|::|.::|.
plant   106 SLNKEFGPVM------KEHMNYIVDHAEEI-------EKLIKVKAQVSEVKSIMLENIDKAIDRG 157

  Fly    74 QKLSELGERADQLEQGASQFEQQAG 98
            :.|:.|.::.:.|...|.::::..|
plant   158 ENLTVLTDKTENLRSQAREYKKTKG 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 16/55 (29%)
VAMP724NP_193313.6 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 73 1.000 Domainoid score I3265
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X424
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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