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Protein Alignment Syb and Sec22c
DIOPT Version :9
Sequence 1: | NP_001137633.1 |
Gene: | Syb / 36080 |
FlyBaseID: | FBgn0003660 |
Length: | 152 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038938688.1 |
Gene: | Sec22c / 687022 |
RGDID: | 1590146 |
Length: | 306 |
Species: | Rattus norvegicus |
Alignment Length: | 97 |
Identity: | 19/97 - (19%) |
Similarity: | 39/97 - (40%) |
Gaps: | 24/97 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 NYNQFGDHQIRNNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQF 93
::|.....|:: :..:|..::.:::...||.:...:|...| |...|...
Rat 125 HFNHMSSSQMK--SGLEKIQEELKSQPPAVVSLEGTDVANGL---------------LNGHAPAH 172
Fly 94 EQQAGKLKRKQWWANMKMMIILGVIAVVLLII 125
.:.|..|: ||.:..|||:::||.|:
Rat 173 SEPAPNLR-------MKPVTALGVLSLVLNIM 197
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Syb | NP_001137633.1 |
Synaptobrevin |
44..130 |
CDD:395764 |
17/82 (21%) |
Sec22c | XP_038938688.1 |
Longin |
5..123 |
CDD:341428 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166340331 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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