DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and VAMP7

DIOPT Version :10

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001172112.1 Gene:VAMP7 / 6845 HGNCID:11486 Length:260 Species:Homo sapiens


Alignment Length:57 Identity:18/57 - (31%)
Similarity:31/57 - (54%) Gaps:2/57 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PPNANDNYNQFGDHQIRNN--NAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLS 77
            |...|..::.....|::::  |....|:.:|||:|||:.|||..|:...|:..|:.|
Human    99 PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIVCHLQNYQQKS 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 14/34 (41%)
VAMP7NP_001172112.1 Longin 4..116 CDD:341428 3/16 (19%)
SNARE 124..>144 CDD:473982 10/19 (53%)

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