DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and si:ch73-234b20.5

DIOPT Version :10

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001280112.1 Gene:si:ch73-234b20.5 / 449923 ZFINID:ZDB-GENE-041008-183 Length:101 Species:Danio rerio


Alignment Length:86 Identity:34/86 - (39%)
Similarity:57/86 - (66%) Gaps:0/86 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 AAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWA 107
            |...||.|.|.:|::|..|::.|:.|||||.::|.:|..:.|.|:..|..|::.:..:.||.||.
Zfish    10 APPSKLNQVQDQVNDVKVILKDNINKVLERGERLDDLIGKTDDLQATADSFQRTSTHVARKMWWR 74

  Fly   108 NMKMMIILGVIAVVLLIIVLV 128
            |.|||||:||:.|.::::::|
Zfish    75 NTKMMIIIGVVVVAIIVLIIV 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 33/85 (39%)
si:ch73-234b20.5NP_001280112.1 SNARE 12..79 CDD:473982 25/66 (38%)

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