DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and snb-7

DIOPT Version :9

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001023622.1 Gene:snb-7 / 3565852 WormBaseID:WBGene00014084 Length:102 Species:Caenorhabditis elegans


Alignment Length:100 Identity:33/100 - (33%)
Similarity:56/100 - (56%) Gaps:17/100 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PPPNANDNYNQFGDHQIRNNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQL 86
            |||.:...::             .:|:.:|:.::|.|..||:.||:|::||..||.:|.|||.:|
 Worm     5 PPPVSRVGWD-------------DQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRL 56

  Fly    87 EQGASQFEQQAGKLKRK-QWWANMKMMIILGVIAV 120
            |:.:..:.:.|.|:||: .|.||   .:..|:|||
 Worm    57 EEASDVYVKCAVKIKREMSWKAN---SLRYGIIAV 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 29/77 (38%)
snb-7NP_001023622.1 Synaptobrevin 14..88 CDD:366387 28/89 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45701
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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