DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and sec22bb

DIOPT Version :9

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001315455.1 Gene:sec22bb / 327277 ZFINID:ZDB-GENE-030131-5488 Length:219 Species:Danio rerio


Alignment Length:91 Identity:22/91 - (24%)
Similarity:45/91 - (49%) Gaps:4/91 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 NNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQW 105
            ::.|::.|.....::.:|..||..|:|:||:|.:.||.|..:|..|...:.::...|..|..:..
Zfish   132 DSRARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTRST 196

  Fly   106 WANMKMMIILGVIAVVLLIIVLVSVW 131
            :|.    :..|.:..::||:.:...|
Zfish   197 YAK----LAAGGVFFIMLIVYIRFWW 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 21/85 (25%)
sec22bbNP_001315455.1 SNC1 12..192 CDD:227472 16/59 (27%)
Longin 41..107 CDD:290490
R-SNARE_SEC22 136..199 CDD:277219 16/62 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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