Protein Alignment Syb and Vamp3

DIOPT Version :9

• Sequence 1: NP_001137633.1
• Gene: Syb / 36080
• FlyBaseID: FBgn0003660
• Length: 152
• Species: Drosophila melanogaster
• Sequence 2: NP_476438.1
• Gene: Vamp3 / 29528
• RGDID: 61880
• Length: 103
• Species: Rattus norvegicus
• Alignment Length: 88
• Identity: 55/88 - (62%)
• Similarity: 70/88 - (79%)
• Gaps: 2/88 - (2%)

  Fly    44 AQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWAN 108
            :.::|||||.:|||||.||||||:||||||||||||.:|||.|:.||||||..|.|||||.||.|
  Rat    15 SNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKN 79

  Fly   109 MKMMIILGVIAVVLLIIVLVSVW 131
            .||..|  .|:|:::|::::.||
  Rat    80 CKMWAI--GISVLVIIVIIIIVW 100

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syb	NP_001137633.1	Synaptobrevin	44..130	CDD:395764	53/85 (62%)
Vamp3	NP_476438.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..25		5/9 (56%)
		R-SNARE_VAMP2	17..79	CDD:277223	46/61 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166340330
Domainoid	1	1.000	125	1.000	Domainoid score	I5330
eggNOG	1	0.900	-	-		E1_COG5143
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000385
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45701
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X424
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.800