DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syb and ykt6

DIOPT Version :9

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_596561.1 Gene:ykt6 / 2539873 PomBaseID:SPBC13G1.11 Length:197 Species:Schizosaccharomyces pombe


Alignment Length:91 Identity:24/91 - (26%)
Similarity:43/91 - (47%) Gaps:14/91 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SGSNNNDFPILPPPPNANDNY-NQFGDHQIRNNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERD 73
            ||:....||.|       |.| :::.|.:..:.      :.:.|.::||...::...:|.||.|.
pombe   112 SGAVTLSFPEL-------DTYLSKYQDPKQADT------IMRVQQELDETKDVLHKTIESVLARG 163

  Fly    74 QKLSELGERADQLEQGASQFEQQAGK 99
            :||.:|.:|:|.|...:..|.:.|.|
pombe   164 EKLDDLIQRSDNLSTQSRMFYKSAKK 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 16/56 (29%)
ykt6NP_596561.1 SNC1 3..197 CDD:227472 24/91 (26%)
Longin 44..114 CDD:290490 1/1 (100%)
R-SNARE_YKT6 135..194 CDD:277220 16/61 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.