DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syb and Vamp9

DIOPT Version :10

Sequence 1:NP_001137633.1 Gene:Syb / 36080 FlyBaseID:FBgn0003660 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001365349.1 Gene:Vamp9 / 102639650 MGIID:5595070 Length:214 Species:Mus musculus


Alignment Length:110 Identity:32/110 - (29%)
Similarity:56/110 - (50%) Gaps:7/110 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PPN--ANDNYNQFGDHQIR-NNNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERD-QKLSELGERA 83
            |.|  |.|.......|.:. |...:...|...:::|.:|..:|..|::.||||: :.:|.|.|.|
Mouse   100 PSNALATDFQQILAQHMMEYNRTRSSSMLSVVKSRVSDVKSVMLRNMDAVLERETETVSVLTEEA 164

  Fly    84 DQLEQGASQFEQQAGKLKRKQWWANMKMMIILGVIAVVLLIIVLV 128
            |..:..|.:|| ...|:.::.||...|  |::..:|:.|.||:::
Mouse   165 DDPQATAEEFE-TTRKIPKRTWWKCFK--IVITTLAIPLSIIIIL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SybNP_001137633.1 Synaptobrevin 44..130 CDD:395764 26/86 (30%)
Vamp9NP_001365349.1 longin-like 5..119 CDD:365781 5/18 (28%)
SNARE 125..191 CDD:473982 21/68 (31%)

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