DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csgalnact and csgalnact1

DIOPT Version :10

Sequence 1:NP_610567.1 Gene:Csgalnact / 36079 FlyBaseID:FBgn0033500 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_002934039.1 Gene:csgalnact1 / 100497098 XenbaseID:XB-GENE-976931 Length:529 Species:Xenopus tropicalis


Alignment Length:560 Identity:216/560 - (38%)
Similarity:304/560 - (54%) Gaps:83/560 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLLFALLTGASIVVLTKCGFDELTTRE-------TQANNPSESSGFSYTLSEREAE----IERLK 67
            :||..|....|::.:..|     |.|.       |:||:|:...|:...|.|||.|    |..||
 Frog    15 ILLVCLCCVVSVLYMLAC-----TPRSEDEQLSLTRANSPTGKEGYHAVLQEREEEHRNYITSLK 74

  Fly    68 QEVLALRTQILFLQNNRSTAKPSNGSLQLQETTAGPPTAPLGHHYDCSS----------YIRKQV 122
            :::..|:.::            ...|.|| :|..||.:..:|..:|..|          ::..||
 Frog    75 KQIAQLKDEL------------QQRSEQL-KTVQGPYSDTVGVAFDHGSPEKAQNDLIDFLHSQV 126

  Fly   123 GAAEILHGLPLNNEYELIPYNHFTFTRVYPIDLGLGKRVVEKPIGYRRRD-LIEAVNKALESLNR 186
            ..||:.:|:.:..||..||::.||..:||.::.||.:...|||:...:|| |.|.|:.||::||.
 Frog   127 NKAEVHNGVKVPTEYAAIPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAETVDVALDALNS 191

  Fly   187 NHSARIRAKGAGSAAAYASDVIKYTLDDFIEGIYRNEPTTGTQYELYFQSVKHQASPVRRALVMR 251
            .....|..:..            ||..||||||||.|...||.|||.|:..|.|  ..:|.::.|
 Frog   192 PEEGGISHRKV------------YTSADFIEGIYRTEKDKGTLYELSFKGEKSQ--EFKRLVLFR 242

  Fly   252 PFAPLQTVQLSELSSSVDNSGAPPSHSPPIIHVILPLAGRLHSFRGFLQMFAKL---EDRRLELI 313
            ||.|:..|:...|:.           :..|:::|:|||.|...|:.|:|.|.::   :|.|:.|.
 Frog   243 PFGPIMKVKNERLNM-----------ANVIVNIIVPLAKRADKFQQFMQNFREVCIHQDGRIHLT 296

  Fly   314 VVYFGTSGLEQARSL------AGRSQRTQFLALNETFSRAKALRLGAEHIQPAEEDVLLFMCDVD 372
            |||||.....:.||:      |...:...|:.|||.|||.|.|.:||...:.:  :||||.||||
 Frog   297 VVYFGKEQAHEVRSILENTSKAANFKNFTFIQLNEEFSRGKGLDVGARAWKGS--NVLLFFCDVD 359

  Fly   373 IMFTTKFLERCRWNAAPGKKVYYPVVFSLYNPHVVYSLQGKPLPSEEEQLVISRDTGFWRDFGYG 437
            |.||.:||..||.|..|||:|:|||:||.|||.::|. ....:||.::||||.:|||||||||:|
 Frog   360 IYFTAEFLNSCRINTQPGKRVFYPVLFSQYNPSIIYG-HHDAIPSIDQQLVIKKDTGFWRDFGFG 423

  Fly   438 MTCQYRSNFLKVRGFDEEEIVGWGGEDVMLYRKYVRSKIKIIRATDPGIFHRWHTKICSSSLTAD 502
            |||||||:|:.:.||| .:|.|||||||.|||||:.|.:.:||....|:.|.||.|.|...|..:
 Frog   424 MTCQYRSDFINIGGFD-IDIKGWGGEDVHLYRKYLHSNLIVIRTPVKGLVHLWHEKRCMDELAPE 487

  Fly   503 QYRACIRSRALNEASHAQLGFLAFRDDIAA-----ANAAK 537
            ||:.|::|:|:|||||.|||.|.||.:|.|     .||.|
 Frog   488 QYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQRNAIK 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CsgalnactNP_610567.1 CHGN <134..521 CDD:461712 170/396 (43%)
csgalnact1XP_002934039.1 CHGN 73..506 CDD:461712 187/474 (39%)

Return to query results.
Submit another query.