DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and TYRDC

DIOPT Version :9

Sequence 1:NP_001260855.1 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_001329473.1 Gene:TYRDC / 828986 AraportID:AT4G28680 Length:566 Species:Arabidopsis thaliana


Alignment Length:517 Identity:201/517 - (38%)
Similarity:293/517 - (56%) Gaps:55/517 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFKEYRQRGKEMVDYIADYLENIRER-RVFP---DVSPGYMRQLLPESAPIEGEPWPKIFSDVE 61
            ||.:..|::|..|||:||||.:|:::. :.||   .|.|||:|.:||:|||...|...::..||.
plant    51 MDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVS 115

  Fly    62 RIVMPGITHWQSPHMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMI 126
            :.:||||||||||...||:.:..|:...||:||...::.:||||.:|||.|||||||::||.|::
plant   116 KKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLL 180

  Fly   127 GLPDAFLHLSSQSQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQ 191
            .|||.||. :.:..||||:|.|..||.||.:||.|.|.:::..:        .:..:||.|.|||
plant   181 QLPDHFLS-TGKGNGGGVIQGTGCEAVLVVVLAARDRILKKVGK--------TLLPQLVVYGSDQ 236

  Fly   192 AHSSVEKAALIG-----LVRMRYIEADDDLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCS 251
            .|||..||.|||     .:|:...::..:..|..:.|.|||..|:.:|.:||::|||:|||.|.:
plant   237 THSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAA 301

  Fly   252 FDNLEEIGIVCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALW 316
            .|.|..:|.:..::.:||||||||||:|.||||:|.::.|||.|||...|..|||..:...:.||
plant   302 VDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLW 366

  Fly   317 VRDSTAVHRTFNVEPLYLQHENS--GVAVDFMHWQIPLSRRF----------------------- 356
            |:|..::.......|.||:.:.|  ...|::..|||.|||||                       
plant   367 VKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRFFISPFDVVFAGPISLTNLYVH 431

  Fly   357 -----RALKVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVFR---IR 413
                 |:||:|.|||.||.:.|:..||:.|.||:.||..|..|..||:...|:..||.||   :.
plant   432 AFDLYRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVD 496

  Fly   414 GD----NEITEKLLKRLNHRGNLHCIPSSLKGQYVIRFTITSTHTTLDDIVKDWMEIRQVAS 471
            ||    ||...:||..:|..|.:....::|.|::|:||.:.:..|....:.:.|..|::.||
plant   497 GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHAS 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_001260855.1 Pyridoxal_deC 35..413 CDD:278699 168/415 (40%)
TYRDCNP_001329473.1 PLN02590 2..566 CDD:178200 201/517 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 368 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 417 1.000 Inparanoid score I444
OMA 1 1.010 - - QHG57772
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - mtm1068
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - O PTHR11999
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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