DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hdc and AT4G09070

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_192646.1 Gene:AT4G09070 / 826485 AraportID:AT4G09070 Length:219 Species:Arabidopsis thaliana


Alignment Length:498 Identity:93/498 - (18%)
Similarity:160/498 - (32%) Gaps:157/498 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 TEESASSERESETKTETSLSASTCASAQQMYLNNLILAQQQKISTNYNILLSPA---------GR 444
            :|:....|..||.||....|.|:.||..:..: :|:.|..:.|....:.||.|.         .:
plant     4 SEKGVVEEWLSEFKTLPEASISSYASGLKNKI-SLVSALYEVIQKPQSELLEPVCHQLFEFYRSK 67

  Fly   445 SESRGSLGPGHLPPLVPCLTTSSGADQTKS------------------EPNNNP----TTSSESK 487
            .:..|:.....||.|:.|..:.|.:.:.:|                  |..::.    |..|.||
plant    68 EKCLGTFTLQFLPELIWCYLSMSSSRELQSCGCIEALLLSIYNLEIMDEQGHSKILSFTIPSLSK 132

  Fly   488 SAPSSPPANV--------------------------IKIDTASNLFGNLRHVLTTMNSVGCSGLL 526
            .:....|:::                          .::.||.|.|..|..:|...|||     |
plant   133 PSVYHEPSSIGSMALTEGALSQHGLTRVVYSGPHPQREMLTAQNRFEVLSFLLLCYNSV-----L 192

  Fly   527 DSKPR------------------PVDEAKSAE----KLVISQQEKYKRILT--YYKTAIQQHQQQ 567
            :..|.                  |...|:..:    ::.|| .|...::||  ||..    :..:
plant   193 NDMPALSLLSLCQMCSRLCVCGYPRQNARKYQGIKNRIPIS-SEFMVQLLTGIYYSF----YNGE 252

  Fly   568 TSTANAALPQWYDVNYAYS--------GLHSIIHPPPPDVNLWGCGSTLKLEPQQPLEIECKFCF 624
            ...|..||.   ||.|...        .|.:.|....|...|.|     ..|..:.:::|.....
plant   253 WDAARRALD---DVLYRAQLELLPEPLLLANAIKASLPQGALKG-----NKEGSRCIQVEITPTS 309

  Fly   625 ENYSQHSCQFYPPQPAEFTVKSYR---------RGKPVVCECCDFSDGESEKYQPDMTEAAASSL 680
            ...|:::.       ...:::.:|         .|:..:.|..:.|:|.|.:...:.::.|.|..
plant   310 SRISRNAV-------TSMSIRGHRWKRHDSADLTGQDELAEISEVSEGFSPRAASNTSQTALSHS 367

  Fly   681 ASTS----------------------KAAAGDG-----GKTISSTSAVERTDLLEQKRRPLADEE 718
            .|.|                      |.:|||.     .:..:..:..|..:|:..||..|...:
plant   368 NSNSFSKPPFGKPQRRSLGSRIGGKEKESAGDSCREHLSRKQNQRALSENLELVSMKRLTLTTSQ 432

  Fly   719 S-----KEADARVTKRAKCES-ESAVGDSASPSNVTKNGTNGA 755
            |     ..:.||.......:| |...|.||:.:|.....:.||
plant   433 SLPKPGSHSLARTATAVFSKSFEQMSGASAAANNPVHGNSTGA 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 8/23 (35%)
AT4G09070NP_192646.1 Med20 1..208 CDD:400779 40/209 (19%)

Return to query results.
Submit another query.