DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and GAD5

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_188403.1 Gene:GAD5 / 821044 AraportID:AT3G17760 Length:494 Species:Arabidopsis thaliana


Alignment Length:461 Identity:91/461 - (19%)
Similarity:166/461 - (36%) Gaps:133/461 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YIADYLENIRERRVFPD--VSPGYMRQLLPESAPIEGEPWPKIFSDVERIVMPGITHWQSPHMHA 78
            :.:.|:..:..|...||  :......|::.:...::|.|...:.|.|        |.|..|.   
plant    17 FASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFV--------TTWMEPE--- 70

  Fly    79 YFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSSQSQGGG 143
                       ...::.|::|.........|..|||:...:|.:..:...|              
plant    71 -----------CDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIANLFHAP-------------- 110

  Fly   144 VLQTTASEATLVCLLAGRTRAIQ----RFHERHPGYQDAE---------INARLVAYCSDQAHSS 195
               ....||.:.|...|.:.||.    .|..:....:.|:         :....|..|       
plant   111 ---VGEDEAAIGCGTVGSSEAIMLAGLAFKRKWQHRRKAQGLPIDKPNIVTGANVQVC------- 165

  Fly   196 VEKAALIGLVRMRYIEADDDLAMR--GKLLREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEI 258
            .||.|....|.::.::..:|..:.  .|.:....|:.|       .|.|.||:|.:..|::::::
plant   166 WEKFARYFEVELKEVKLSEDYYVMDPAKAVEMVDENTI-------CVAAILGSTLTGEFEDVKQL 223

  Fly   259 GIVCAEHHL---W---LHVDAAYAGSAFICP--------EFR-TWLRGIERADSIAFNPSKWLMV 308
            ..:.||.:.   |   :|||||..|  ||.|        :|| .|::      ||..:..|:.:|
plant   224 NDLLAEKNAETGWETPIHVDAASGG--FIAPFLYPDLEWDFRLPWVK------SINVSGHKYGLV 280

  Fly   309 HFDATALWV----RDSTAVHRTFNVEPLYLQHENSGVAVDFMHW--QIPLSRRFRALKVWFVLRS 367
            :  |...||    :|.......|::.  ||..:.....::|...  || :::.::.:::.|    
plant   281 Y--AGVGWVVWRTKDDLPEELVFHIN--YLGADQPTFTLNFSKGSSQI-IAQYYQFIRLGF---- 336

  Fly   368 YGIKGLQ-------RHIREGVRLAQKFEALVLADHRFELPAKRHLG--LVVFRIRGDN-----EI 418
            .|.|.:.       |.:|||:.:..||..:           .:.:|  ||.|.::..:     ||
plant   337 EGYKNIMENCMDNARRLREGIEMTGKFNIV-----------SKDIGVPLVAFSLKDSSKHTVFEI 390

  Fly   419 TEKLLK 424
            .|.|.|
plant   391 AESLRK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 82/422 (19%)
GAD5NP_188403.1 Glu-decarb-GAD 15..444 CDD:130848 91/461 (20%)

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