DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hdc and Gadl1

DIOPT Version :10

Sequence 1:NP_523679.2 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:NP_001382689.1 Gene:Gadl1 / 73748 MGIID:1920998 Length:522 Species:Mus musculus


Alignment Length:553 Identity:143/553 - (25%)
Similarity:231/553 - (41%) Gaps:125/553 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KEMVDYIADYLENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPKIFSDVERIVMPGITHWQSPH 75
            :|:|....|..|.:.|.:     .|..:||||.......||...|:....:.::     |:....
Mouse    59 EEVVLKATDVNEKVCEWQ-----PPEQLRQLLDLEMRDTGESQDKLLKLCQDVI-----HFSVKT 113

  Fly    76 MHAYFPALNSM------PSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPDAFLH 134
            .|..|  .|.:      .||...::.:|:|...:|:..||....:|..|:..:.:.:|       
Mouse   114 NHPRF--FNQLYAGLDYYSLAARIITEALNPSIYTYEVSPVFLLVEEAVLKKMIECVG------- 169

  Fly   135 LSSQSQGGGVLQTTASEATLVCLLAGRTRAIQRFHERH-PGYQDAEINA--RLVAYCSDQAHSSV 196
               ..:|.|:.....|.:.:..:...|        .|| |..::..::.  ||:.:.|.:.|.|:
Mouse   170 ---WKEGDGIFNPGGSVSNMCAMNLAR--------YRHCPDIKEKGLSGLPRLILFTSAECHYSM 223

  Fly   197 EKAAL---IGLVRMRYIEADDDLAMRGKLLREAIEDDI----KQGLVPFWVCATLGTTGSCSFDN 254
            :|||.   ||...:.::|.|.    |||::.|.:|..|    ::|.|||.||||.|||...:||.
Mouse   224 KKAASFLGIGTQNVYFVETDG----RGKMIPEDLEKQIWQARQEGAVPFLVCATSGTTVLGAFDP 284

  Fly   255 LEEIGIVCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRD 319
            |:||..||..|.|||||||::.|||.:..:.|..|.||.||||:|:||.|.||.....:||.|:|
Mouse   285 LDEIAEVCERHGLWLHVDASWGGSALVSRKHRRLLHGIHRADSVAWNPHKMLMAGIQCSALLVKD 349

  Fly   320 -STAVHRTFNVEPLYL--QHENSGVAVDFMHWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGV 381
             |..:.:.::.:..||  |.:...|:.|.....|..|||..|.|.|...::.|..||:..:....
Mouse   350 KSDLLKKCYSAKATYLFQQDKFYDVSYDTGDKSIQCSRRPDAFKFWMTWKALGTSGLEERVNRAF 414

  Fly   382 RLAQKFEALVLADHRFELPAKRHLGLVVFRIRGDNEITEKLLKRLNHRGNLHC---IPSSLKGQY 443
            .|::     .|.|.     .|:..|   |::..:.|.|..            |   ||.||:   
Mouse   415 ALSR-----YLVDE-----IKKREG---FKLLMEPEYTNV------------CFWYIPPSLR--- 451

  Fly   444 VIRFTITSTHTTLDDIVKDWMEIRQVASTVLEEMNITISNRVYLKETKEKNEAFGSSLLLSNSP- 507
                       .:::..:.|.::..||..:.|:|         :|:         .||:|...| 
Mouse   452 -----------EMEEGPEFWRKLSLVAPAIKEKM---------MKK---------GSLMLGYQPH 487

  Fly   508 -----------LSPKVVNGSFAAIFDADEFLAK 529
                       :||:|.......:.|..:.|.:
Mouse   488 RGKVNFFRQVVISPQVSREDMDFLLDEIDSLGR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_523679.2 Pyridoxal_deC 35..413 CDD:395219 116/396 (29%)
Gadl1NP_001382689.1 GadA 76..521 CDD:439846 138/536 (26%)

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