DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hdc and CSAD

DIOPT Version :9

Sequence 1:NP_001260855.1 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster
Sequence 2:XP_024304779.1 Gene:CSAD / 51380 HGNCID:18966 Length:620 Species:Homo sapiens


Alignment Length:521 Identity:119/521 - (22%)
Similarity:200/521 - (38%) Gaps:113/521 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QRGKEMVDYIADYLENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPKIFSDVERIVMPGITHWQ 72
            |:|..:...:.::.|            |..::|||......:||...:|......::...:....
Human   130 QKGTSVSQKVCEWKE------------PEELKQLLDLELRSQGESQKQILERCRAVIRYSVKTGH 182

  Fly    73 SPHMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPDAFLHLSS 137
            ....:..|..|:. .:|.|.::.:::|...:|:..:|....:|..|:..|..::|          
Human   183 PRFFNQLFSGLDP-HALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVG---------- 236

  Fly   138 QSQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSSVEKAALI 202
            .|.|.|:.....|.:.:..:...|       ::|:|.             |..:...::...||.
Human   237 WSSGDGIFCPGGSISNMYAVNLAR-------YQRYPD-------------CKQRGLRTLPPLALF 281

  Fly   203 -------------GLV-------------RMRYIEADDDLAMRGKLLREA--------------- 226
                         ||:             .:|:.:....::...:|:||.               
Human   282 TSKEVGKRHRPNPGLLILISSHVTTPSRRELRFWDLAPTVSEWSRLMREGKWSPRIWRGRLVWPR 346

  Fly   227 -------IEDDI-KQGLVPFWVCATLGTTGSCSFDNLEEIGIVCAEHHLWLHVDAAYAGSAFICP 283
                   .|..| ..|.|||.|.||.|||...:||.||.|..||..|.||||||||:.||..:..
Human   347 LRLTFHFFETFILDSGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQ 411

  Fly   284 EFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRD-STAVHRTFNVEPLYL--QHENSGVAVDF 345
            ..|..|.||:||||:|:||.|.|......:||.::| |..:.|....:..||  |.:...||:|.
Human   412 THRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDT 476

  Fly   346 MHWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVF 410
            ....:...||...||:|.:.::.|.:||:|.|.:...||:.....:.....|||..:.....|.|
Human   477 GDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCF 541

  Fly   411 -----RIRGDNE----------ITEKLLKRLNHRGNLHC--IPSSLKGQYVIRFTITSTHTTLDD 458
                 .:||..|          :...|.:|:...|::..  .|...:|.: .|..:.::..|..|
Human   542 WFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNF-FRVVVANSALTCAD 605

  Fly   459 I 459
            :
Human   606 M 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HdcNP_001260855.1 Pyridoxal_deC 35..413 CDD:278699 105/434 (24%)
CSADXP_024304779.1 DOPA_deC_like 185..616 CDD:99743 109/454 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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